RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 PATJQ8NI35 1801 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 CCL15-CCL14A0A0B4J2E2 113 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 A0A1W2PQH9 124 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 TCRBV5S2A0A599 114 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 SH3PXD2BA1X283 911 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 ASPDHA6ND91 283 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 WASH4PA8MWX3 477 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 H3BMQ9 156 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 CLASP2O75122 1294 aaKnown RBP20.32■□□□□ 0.84
NEK3-208ENST00000618534 RPL9P32969 192 aaKnown RBP20.32■□□□□ 0.84
NEK3-208ENST00000618534 RFC2P35250 354 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 FOXM1Q08050 763 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 CCL15Q16663 113 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 GPR107Q5VW38 600 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 ZNF354CQ86Y25 554 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 UMODL1-AS1Q8N2C9 162 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 TEX37Q96LM6 180 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 COG8Q96MW5 612 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 ALG2Q9H553 416 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 RPF2Q9H7B2 306 aaKnown RBP20.32■□□□□ 0.84
NEK3-208ENST00000618534 GPR45Q9Y5Y3 372 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 ARL5AQ9Y689 179 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 PTPRDP23468 1912 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 GIPC1O14908 333 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 CNTN5O94779 1100 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 MT-ND1P03886 318 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 HNRNPCP07910 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
NEK3-208ENST00000618534 IDO1P14902 403 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 RAB39AQ14964 217 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 ABRAXAS1Q6UWZ7 409 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 PGBD5Q8N414 524 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 MS4A4AQ96JQ5 239 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 TRIM54Q9BYV2 358 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 POLR1BQ9H9Y6 1135 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 CD320Q9NPF0 282 aa20.32■□□□□ 0.84
NEK3-208ENST00000618534 SMPD3Q9NY59 655 aaPredicted RBP20.32■□□□□ 0.84
NEK3-208ENST00000618534 TDRKHQ9Y2W6 561 aaKnown RBP20.32■□□□□ 0.84
NEK3-208ENST00000618534 OAS3Q9Y6K5 1087 aaKnown RBP20.32■□□□□ 0.84
NEK3-208ENST00000618534 NLRC5Q86WI3 1866 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 TNFRSF10BO14763 440 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 CD3EAPO15446 510 aaKnown RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 GLP2RO95838 553 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 POMCP01189 267 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 FCGR1AP12314 374 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 EEF1DP29692 281 aaKnown RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 GRIK1P39086 918 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 CAPGP40121 348 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 LIPEQ05469 1076 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 ANKDD1AQ495B1 522 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 FUT11Q495W5 492 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 ALFQ53S48 1182 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 CYBRD1Q53TN4 286 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 COQ5Q5HYK3 327 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 ZNF554Q86TJ5 538 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 DHRSXQ8N5I4 330 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 ARRDC2Q8TBH0 407 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 KCTD14Q9BQ13 255 aaPredicted RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 SEZ6LQ9BYH1 1024 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 SEMA4BQ9NPR2 832 aaPredicted RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 TIMM22Q9Y584 194 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 CCDC162PA2VCL2 907 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 BAIAP3O94812 1187 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 C7P10643 843 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 CES1P23141 567 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 MRPS6P82932 125 aaKnown RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 NRG1Q02297 640 aaPredicted RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 CLCQ05315 142 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 CACNB2Q08289 660 aaPredicted RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 PAGE3Q5JUK9 113 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 TMEM26Q6ZUK4 368 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 MAGEE2Q8TD90 523 aaPredicted RBP20.31■□□□□ 0.84
NEK3-208ENST00000618534 BLOC1S5Q8TDH9 187 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 BRI3BPQ8WY22 251 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 USP22Q9UPT9 525 aa20.31■□□□□ 0.84
NEK3-208ENST00000618534 MYO16Q9Y6X6 1858 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 A0A1W2PP18 115 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 SUPT3HB4E1H0 165 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 SUPT3HO75486 399 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 SNAP29O95721 258 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 CTSHP09668 335 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 RPS9P46781 194 aaKnown RBP20.3■□□□□ 0.84
NEK3-208ENST00000618534 YAP1P46937 504 aaKnown RBP20.3■□□□□ 0.84
NEK3-208ENST00000618534 SUOXP51687 545 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 LCP2Q13094 533 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 FSCN1Q16658 493 aaKnown RBP20.3■□□□□ 0.84
NEK3-208ENST00000618534 CD300LGQ6UXG3 332 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 Q6ZNX1 250 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 PATL1Q86TB9 770 aaKnown RBP20.3■□□□□ 0.84
NEK3-208ENST00000618534 OR13C4Q8NGS5 318 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 RHEBL1Q8TAI7 183 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 TMEM74Q96NL1 305 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 NAA50Q9GZZ1 169 aaKnown RBP20.3■□□□□ 0.84
NEK3-208ENST00000618534 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.3■□□□□ 0.84
NEK3-208ENST00000618534 ANAPC2Q9UJX6 822 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 ZNF510Q9Y2H8 683 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 V9GYQ6 96 aa20.3■□□□□ 0.84
NEK3-208ENST00000618534 A0A1W2PPW3 197 aa20.29■□□□□ 0.84
NEK3-208ENST00000618534 CYP11A1P05108 521 aa20.29■□□□□ 0.84
NEK3-208ENST00000618534 PRSS56P0CW18 603 aa20.29■□□□□ 0.84
NEK3-208ENST00000618534 DCKP27707 260 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms