RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 IL17CQ9P0M4 197 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 ZDHHC2Q9UIJ5 367 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 SLC12A4Q9UP95 1085 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 PKP3Q9Y446 797 aa7.77□□□□□ -1.17
NEK3-207ENST00000617054 C2orf16Q68DN1 1984 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 F5P12259 2224 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 A0A0J9YYE9 177 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 TARM1B6A8C7 271 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 PLK4O00444 970 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 RHOBTB1O94844 696 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 SIX3O95343 332 aaPredicted RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 IGSF6O95976 241 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 TRBC1P01850 177 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CYP17A1P05093 508 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 HNRNPA1P09651 372 aaKnown RBP eCLIP7.76□□□□□ -1.17
NEK3-207ENST00000617054 FBXO45P0C2W1 286 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CD46P15529 392 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CHRM3P20309 590 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CRABP2P29373 138 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CDH13P55290 713 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 NCALDP61601 193 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 XIAPP98170 497 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 BNIP1Q12981 228 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 GRM2Q14416 872 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 KIAA0408Q6ZU52 694 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 OR2A12Q8NGT7 310 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 NXPE3Q969Y0 559 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 WDR55Q9H6Y2 383 aaPredicted RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 ATP13A3Q9H7F0 1226 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 IL26Q9NPH9 171 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 ARL8BQ9NVJ2 186 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 UTP6Q9NYH9 597 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 A8MUI8 341 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 PRRT4C9JH25 899 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 MTX2O75431 263 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 PRAMEF1O95521 474 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 BPIP17213 487 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 POLR2EP19388 210 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 CLCN5P51795 746 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 SNRPD1P62314 119 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 KDSRQ06136 332 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 DLX2Q07687 328 aaPredicted RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 OR4D1Q15615 310 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 FAM83EQ2M2I3 478 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 LACTB2Q53H82 288 aaPredicted RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 LRRC66Q68CR7 880 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 TANGO2Q6ICL3 276 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 ISCA2Q86U28 154 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 LPGAT1Q92604 370 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 UBXN10Q96LJ8 280 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 RPP25Q9BUL9 199 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 ASB8Q9H765 288 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 COG4Q9H9E3 785 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 ZDHHC7Q9NXF8 308 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 MBD1Q9UIS9 605 aaPredicted RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 SLC25A13Q9UJS0 675 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 LEFTY1O75610 366 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CTSLP07711 333 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 GSTA1P08263 222 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 LTA4HP09960 611 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 LHCGRP22888 699 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CES1P23141 567 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 SERPINA4P29622 427 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 HMGCLP35914 325 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 AP1S1P61966 158 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 PTSQ03393 145 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 RCN2Q14257 317 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 SLC9B1Q4ZJI4 515 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CTSL3PQ5NE16 218 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CRTC1Q6UUV9 634 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 ZYG11AQ6WRX3 759 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 WDR75Q8IWA0 830 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 TRIM42Q8IWZ5 723 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 GPR26Q8NDV2 337 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 FBXO27Q8NI29 283 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 EEF1AKMT1Q8WVE0 214 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 NUF2Q9BZD4 464 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 MRPL46Q9H2W6 279 aaKnown RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 SUV39H2Q9H5I1 410 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.76□□□□□ -1.17
NEK3-207ENST00000617054 HS3ST2Q9Y278 367 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 PRSS21Q9Y6M0 314 aa7.76□□□□□ -1.17
NEK3-207ENST00000617054 DMDP11532 3685 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 TRIOBPQ9H2D6 2365 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 HEPACAM2A8MVW5 462 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 UBXN8O00124 270 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 CDC7O00311 574 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 FCHO1O14526 889 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 GAPDHSO14556 408 aaPredicted RBP7.75□□□□□ -1.17
NEK3-207ENST00000617054 ZNF197O14709 1029 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 HTRA2O43464 458 aaPredicted RBP7.75□□□□□ -1.17
NEK3-207ENST00000617054 TULP3O75386 442 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 ADH5P11766 374 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 EPHA3P29320 983 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 HOXA9P31269 272 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 ERFP50548 548 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 CHRNA6Q15825 494 aa7.75□□□□□ -1.17
NEK3-207ENST00000617054 PDCD2Q16342 344 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms