RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CAPN15O75808 1086 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 JUNP05412 331 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACBD5Q5T8D3 534 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTC23Q5W5X9 447 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SPESP1Q6UW49 350 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 LPCAT2Q7L5N7 544 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM9CQ8IZT9 166 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SELENOMQ8WWX9 145 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 VPS33AQ96AX1 596 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 LINGO1Q96FE5 620 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZFRQ96KR1 1074 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 POLR1BQ9H9Y6 1135 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SCUBE2Q9NQ36 999 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PNMA8BQ9ULN7 279 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TLR6Q9Y2C9 796 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TTC24A2A3L6 582 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 G3V2L1 256 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 DNAJA2O60884 412 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 NIPSNAP2O75323 286 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 STK16O75716 305 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PAPSS2O95340 614 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 EOMESO95936 686 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 GOT2P00505 430 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ESR1P03372 595 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CAPN1P07384 714 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF37AP17032 561 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 OGNP20774 298 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MC4RP32245 332 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SMARCB1Q12824 385 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SERINC3Q13530 473 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 UPP1Q16831 310 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ADGRF1Q5T601 910 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRMT9Q6P2P2 845 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CEP97Q8IW35 865 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARHGAP12Q8IWW6 846 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 IMP4Q96G21 291 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CDK5RAP1Q96SZ6 601 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 HOPXQ9BPY8 73 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCDC106Q9BWC9 280 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MFSD1Q9H3U5 465 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARNT2Q9HBZ2 717 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MARCH4Q9P2E8 410 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MOXD2PA6NHM9 499 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PIP5K1BO14986 540 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MAFKO60675 156 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC22A3O75751 556 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CTPS1P17812 591 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CDH2P19022 906 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SERPINA4P29622 427 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 HALP42357 657 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MAPK8P45983 427 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 OCA2Q04671 838 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 USP41Q3LFD5 358 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 AFTPHQ6ULP2 937 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZBTB46Q86UZ6 589 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 P3H2Q8IVL5 708 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MCOLN3Q8TDD5 553 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TWIST2Q8WVJ9 160 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRIB2Q92519 343 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CACNA2D2Q9NY47 1150 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TNRC6CQ9HCJ0 1690 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CAPN14A8MX76 684 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR4F21O95013 312 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 FESP07332 822 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 WEE1P30291 646 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 S100A3P33764 101 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 STC1P52823 247 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 VAC14Q08AM6 782 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 LPIN1Q14693 890 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 HERC3Q15034 1050 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CRY1Q16526 586 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM98BQ52LJ0 330 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 XKR4Q5GH76 650 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 TPGS1Q6ZTW0 290 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPR141Q7Z602 305 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CILP2Q8IUL8 1156 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 ASB9Q96DX5 294 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 OSBPL11Q9BXB4 747 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM126AQ9BYI3 521 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CSNK1G1Q9HCP0 422 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MYADML2A6NDP7 307 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCDC154A6NI56 674 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 M0R3G1 203 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 SNAP91O60641 907 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 BCAS2O75934 225 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CDK14O94921 469 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 NTRK1P04629 796 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 ANXA5P08758 320 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 KCNA5P22460 613 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PPM1FP49593 454 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCNG1P51959 295 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRAF2Q12933 501 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PLD1Q13393 1074 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 DCTN2Q13561 401 aaKnown RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZIK1Q3SY52 487 aaPredicted RBP5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 MS4A13Q5J8X5 152 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 IL23RQ5VWK5 629 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 PIM3Q86V86 326 aa5.61□□□□□ -1.51
SYNCRIP-204ENST00000616122 OR2T12Q8NG77 320 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms