RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 JPH3Q8WXH2 748 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 ARHGAP9Q9BRR9 750 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 TDRD1Q9BXT4 1180 aaKnown RBP20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 TMEM9Q9P0T7 183 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 CHKBQ9Y259 395 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 TTLL3Q9Y4R7 772 aa20.66■□□□□ 0.9
TRAPPC3-208ENST00000616074 MYO1FO00160 1098 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 MATN3O15232 486 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 INPP4BO15327 924 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 SERPING1P05155 500 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 THRAP10827 490 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 MPSTP25325 297 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 GJC1P36383 396 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 STC1P52823 247 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 CYP4F2P78329 520 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 TRA2AQ13595 282 aaKnown RBP eCLIP20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 HADHQ16836 314 aaKnown RBP20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 CCDC122Q5T0U0 273 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 TIGD7Q6NT04 549 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 NLRP8Q86W28 1048 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 GALNT13Q8IUC8 556 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 LRRN4Q8WUT4 740 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 COX14Q96I36 57 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 TAAR9Q96RI9 348 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 RIOK2Q9BVS4 552 aaKnown RBP20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 RBM22Q9NW64 420 aaKnown RBP eCLIP20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 KCNK4Q9NYG8 393 aa20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 PCYT1BQ9Y5K3 369 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC3-208ENST00000616074 STMND1H3BQB6 276 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 CLDN7O95471 211 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 PRLP01236 227 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 PYGLP06737 847 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 FANCCQ00597 558 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 SQSTM1Q13501 440 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 NFKBIBQ15653 356 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 PRICKLE2Q7Z3G6 844 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 ZNF761Q86XN6 746 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 ZSCAN1Q8NBB4 408 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 EXD1Q8NHP7 514 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 ARRDC2Q8TBH0 407 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 ZNF564Q8TBZ8 553 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 SLC37A2Q8TED4 501 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 CPLX3Q8WVH0 158 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 HTR3CQ8WXA8 447 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 PCDHGA3Q9Y5H0 932 aa20.64■□□□□ 0.89
TRAPPC3-208ENST00000616074 TRBV23OR9-2A0A075B6M9 112 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 EML2O95834 649 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 HLA-DQB2P05538 268 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 FAM87AP0C7U9 286 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 CCNCP24863 283 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 FASLGP48023 281 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 ZBED6P86452 979 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 NIPAL4Q0D2K0 466 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 LRP8Q14114 963 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 TBR1Q16650 682 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 IFI16Q16666 785 aaKnown RBP20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 ANKRD20A8PQ5CZ79 823 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 ALKBH5Q6P6C2 394 aaKnown RBP20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 XKR5Q6UX68 686 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 NRSN1Q8IZ57 195 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 AGBL5Q8NDL9 886 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 LPCAT1Q8NF37 534 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 FATE1Q969F0 183 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 ZNF670Q9BS34 389 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 AMACRQ9UHK6 382 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 DNPEPQ9ULA0 475 aa20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 OAS3Q9Y6K5 1087 aaKnown RBP20.63■□□□□ 0.89
TRAPPC3-208ENST00000616074 TLN1Q9Y490 2541 aaKnown RBP20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 DNAJC6O75061 913 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 ASMTLO95671 621 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 ATP1A1P05023 1023 aaKnown RBP20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 ITGB6P18564 788 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 CES1P23141 567 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 CSTF2P33240 577 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 GPLD1P80108 840 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 TMEM71Q6P5X7 295 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 LUZP1Q86V48 1076 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 SFRP1Q8N474 314 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 KCTD6Q8NC69 237 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 ART4Q93070 314 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 NKD1Q969G9 470 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 TSGA13Q96PP4 275 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 WDR24Q96S15 920 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 DPYSL5Q9BPU6 564 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 FAM117AQ9C073 453 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 ZMYND15Q9H091 742 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 CBX8Q9HC52 389 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 PCDH9Q9HC56 1237 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 STARD5Q9NSY2 213 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 OCIAD1Q9NX40 245 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 CNOT6Q9ULM6 557 aaKnown RBP20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 CAPN11Q9UMQ6 739 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 PRKAB1Q9Y478 270 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 HEMK1Q9Y5R4 338 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 B3GALT1Q9Y5Z6 326 aa20.62■□□□□ 0.89
TRAPPC3-208ENST00000616074 CA4P22748 312 aa20.61■□□□□ 0.89
TRAPPC3-208ENST00000616074 ATP1A2P50993 1020 aa20.61■□□□□ 0.89
TRAPPC3-208ENST00000616074 UBASH3AP57075 661 aa20.61■□□□□ 0.89
TRAPPC3-208ENST00000616074 TAS2R40P59535 323 aa20.61■□□□□ 0.89
TRAPPC3-208ENST00000616074 GBE1Q04446 702 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms