RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TM9SF4Q92544 642 aa12.62□□□□□ -0.39
TCF4-248ENST00000616053 CD101Q93033 1021 aa12.62□□□□□ -0.39
TCF4-248ENST00000616053 CPNE2Q96FN4 548 aaPredicted RBP12.62□□□□□ -0.39
TCF4-248ENST00000616053 ZNF471Q9BX82 626 aaPredicted RBP12.62□□□□□ -0.39
TCF4-248ENST00000616053 FN3KQ9H479 309 aa12.62□□□□□ -0.39
TCF4-248ENST00000616053 TRHDEQ9UKU6 1024 aa12.62□□□□□ -0.39
TCF4-248ENST00000616053 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 B3GALT2O43825 422 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 SCO1O75880 301 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 PVALBP20472 110 aaPredicted RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 CD86P42081 329 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CXCR3P49682 368 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 C2orf80Q0P641 193 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 OGFRL1Q5TC84 451 aaPredicted RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 VANGL1Q8TAA9 524 aaPredicted RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 BORCS7Q96B45 105 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ASB2Q96Q27 587 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ABCG8Q9H221 673 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ALG2Q9H553 416 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 POMKQ9H5K3 350 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 GDAP2Q9NXN4 497 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 SNAP91O60641 907 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 TGFB3P10600 412 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 OVGP1Q12889 678 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 OGFOD2Q6N063 350 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ZNF613Q6PF04 617 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
TCF4-248ENST00000616053 WDR77Q9BQA1 342 aaPredicted RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 MYOM2P54296 1465 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 PDYNP01213 254 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ERVK-24P63145 666 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 LACTB2Q53H82 288 aaPredicted RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 STXBP5Q5T5C0 1151 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CXorf57Q6NSI4 855 aaKnown RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 GCNT7Q6ZNI0 430 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ZNF410Q86VK4 478 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 METTL16Q86W50 562 aaKnown RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 ZNF276Q8N554 614 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 RDH11Q8TC12 318 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 PRKAR1AP10644 381 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 IL12AP29459 219 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 MAGEA12P43365 314 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 MGAT5Q09328 741 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ACOT12Q8WYK0 555 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 MS4A14Q96JA4 679 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 BPIFA3Q9BQP9 254 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ABCB9Q9NP78 766 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CCNB1IP1Q9NPC3 277 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 KCNN3Q9UGI6 736 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 SSR3Q9UNL2 185 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 RFX7Q2KHR2 1363 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ATP6V1G1O75348 118 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 TNFP01375 233 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CBSLP0DN79 551 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CBSP35520 551 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 MRPS6P82932 125 aaKnown RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 MED22Q15528 200 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 GRTP1Q5TC63 336 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 B3GNT4Q9C0J1 378 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 HAO2Q9NYQ3 351 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 FAM205AQ6ZU69 1335 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CAP2P40123 477 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 TXNL4AP83876 142 aaKnown RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
TCF4-248ENST00000616053 PHC3Q8NDX5 983 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 CDH19Q9H159 772 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 SGK2Q9HBY8 427 aa12.61□□□□□ -0.39
TCF4-248ENST00000616053 UCHL3P15374 230 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
TCF4-248ENST00000616053 PITRM1Q5JRX3 1037 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 GHDCQ8N2G8 530 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 C11orf84Q9BUA3 381 aaPredicted RBP12.6□□□□□ -0.39
TCF4-248ENST00000616053 SEC14L3Q9UDX4 400 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 ENDOUP21128 410 aaKnown RBP12.6□□□□□ -0.39
TCF4-248ENST00000616053 CDKL4Q5MAI5 379 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 SLC2A14Q8TDB8 520 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 B3GALT6Q96L58 329 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 SENP8Q96LD8 212 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 PTPN11Q06124 597 aaPredicted RBP12.6□□□□□ -0.39
TCF4-248ENST00000616053 DUSP4Q13115 394 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 GPM6BQ13491 265 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 ATP1A4Q13733 1029 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 C12orf40Q86WS4 652 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 DGCR6LQ9BY27 220 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 DNAJC5Q9H3Z4 198 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 A0A087X1B8 175 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 ANXA2P2A6NMY6 339 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 ANXA2P07355 339 aaKnown RBP12.6□□□□□ -0.39
TCF4-248ENST00000616053 ITGA5P08648 1049 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 OR1D2P34982 312 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 NDST1P52848 882 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 TMEM17Q86X19 198 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 WDR49Q8IV35 697 aa12.6□□□□□ -0.39
TCF4-248ENST00000616053 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms