RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 HSPB3Q12988 150 aa18.65■□□□□ 0.58
GABPB1-212ENST00000615671 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.65■□□□□ 0.58
GABPB1-212ENST00000615671 ABCB10Q9NRK6 738 aa18.65■□□□□ 0.58
GABPB1-212ENST00000615671 ERVK-11Q9UQG0 969 aa18.65■□□□□ 0.58
GABPB1-212ENST00000615671 ERGIC3Q9Y282 383 aa18.65■□□□□ 0.58
GABPB1-212ENST00000615671 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
GABPB1-212ENST00000615671 FGF19O95750 216 aa18.64■□□□□ 0.58
GABPB1-212ENST00000615671 IL12BP29460 328 aa18.64■□□□□ 0.58
GABPB1-212ENST00000615671 DHPSP49366 369 aaPredicted RBP18.64■□□□□ 0.58
GABPB1-212ENST00000615671 C2orf80Q0P641 193 aa18.64■□□□□ 0.58
GABPB1-212ENST00000615671 ATXN2LQ8WWM7 1075 aaKnown RBP18.64■□□□□ 0.58
GABPB1-212ENST00000615671 RCN3Q96D15 328 aa18.64■□□□□ 0.58
GABPB1-212ENST00000615671 CLCC1Q96S66 551 aa18.64■□□□□ 0.58
GABPB1-212ENST00000615671 KCTD15Q96SI1 283 aaPredicted RBP18.64■□□□□ 0.58
GABPB1-212ENST00000615671 CPSF4LA6NMK7 179 aaKnown RBP18.64■□□□□ 0.57
GABPB1-212ENST00000615671 AZIN1O14977 448 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 C22orf31O95567 290 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 DSC2Q02487 901 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 UAP1L1Q3KQV9 507 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 TBC1D25Q3MII6 688 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 PLEKHG4Q58EX7 1191 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 WASHC2DQ5SRD0 308 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CPTPQ5TA50 214 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 OAFQ86UD1 273 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CHERPQ8IWX8 916 aaKnown RBP18.64■□□□□ 0.57
GABPB1-212ENST00000615671 ULK2Q8IYT8 1036 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 NECTIN3Q9NQS3 549 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 A8MU76 341 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CDH5P33151 784 aaPredicted RBP18.64■□□□□ 0.57
GABPB1-212ENST00000615671 TUSC3Q13454 348 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 TEAD4Q15561 434 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 SLC30A6Q6NXT4 461 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 ZFP1Q6P2D0 407 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 RALGPS2Q86X27 583 aaPredicted RBP18.64■□□□□ 0.57
GABPB1-212ENST00000615671 IL12RB2Q99665 862 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CHMP1AQ9HD42 196 aaPredicted RBP18.64■□□□□ 0.57
GABPB1-212ENST00000615671 C2orf71A6NGG8 1288 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 ICAM3P32942 547 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 GNPDA1P46926 289 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 ANXA8L1Q5VT79 327 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 GK5Q6ZS86 529 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 HDDC3Q8N4P3 179 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 NLGN2Q8NFZ4 835 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 TRAPPC9Q96Q05 1148 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 GAL3ST1Q99999 423 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 MCCC2Q9HCC0 563 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 RASSF1Q9NS23 344 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 KCNK4Q9NYG8 393 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 C2CD2Q9Y426 696 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CPED1A4D0V7 1026 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 SUV39H1O43463 412 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 INHAP05111 366 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 CCT3P49368 545 aaKnown RBP18.64■□□□□ 0.57
GABPB1-212ENST00000615671 NAE1Q13564 534 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 IL17AQ16552 155 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 NDUFA9Q16795 377 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 C2orf27AQ580R0 203 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 DSN1Q9H410 356 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 TIMM22Q9Y584 194 aa18.64■□□□□ 0.57
GABPB1-212ENST00000615671 LRRC72A6NJI9 287 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 A8MUA0 341 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 GRSF1Q12849 480 aaKnown RBP eCLIP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 XKR4Q5GH76 650 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 LIPMQ5VYY2 423 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 METTL3Q86U44 580 aaKnown RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 ZNF433Q8N7K0 673 aaPredicted RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 OR2L5Q8NG80 312 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 KBTBD7Q8WVZ9 684 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 HMGB4Q8WW32 186 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 AUTS2Q8WXX7 1259 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 P2RY11Q96G91 374 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 Q96MT0 163 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 hCG_1818297A0A087WSY0 165 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 KPNA4O00629 521 aaPredicted RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 PRKCGP05129 697 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 PBX3P40426 434 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 PPIGQ13427 754 aaKnown RBP eCLIP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 PERM1Q5SV97 790 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 CXXC5Q7LFL8 322 aaKnown RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 CLDND1Q9NY35 253 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 RPL3P39023 403 aaKnown RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 RHBDL3P58872 404 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 FAM110BQ8TC76 370 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 SEMA3GQ9NS98 782 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 RIPK3Q9Y572 518 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 YAP1P46937 504 aaKnown RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 NDUFA5Q16718 116 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 PIWIL2Q8TC59 973 aaKnown RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 GPR20Q99678 358 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 ZNF670Q9BS34 389 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 L1RE1Q9UN81 338 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 DGKEP52429 567 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 LGALS3BPQ08380 585 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 PPIDQ08752 370 aaKnown RBP18.63■□□□□ 0.57
GABPB1-212ENST00000615671 NEK5Q6P3R8 708 aa18.63■□□□□ 0.57
GABPB1-212ENST00000615671 FBXO42Q6P3S6 717 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms