RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 HDAC8Q9BY41 377 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 CD248Q9HCU0 757 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ZDHHC4Q9NPG8 344 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 MED4Q9NPJ6 270 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SMYD2Q9NRG4 433 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 NLE1Q9NVX2 485 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 NSMCE4AQ9NXX6 385 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SLC2A6Q9UGQ3 507 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 LGALS13Q9UHV8 139 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF180Q9UJW8 692 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 SARDHQ9UL12 918 aa11.42□□□□□ -0.58
SLIRP-212ENST00000613856 GCN1Q92616 2671 aaKnown RBP11.42□□□□□ -0.58
SLIRP-212ENST00000613856 ATXN2Q99700 1313 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 SETXQ7Z333 2677 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 C1orf232A0A0U1RR37 186 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 TMEM8BA6NDV4 472 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 NPIPB15A6NHN6 443 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 GOLGA6L10A6NI86 522 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 C16orf96A6NNT2 1141 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 KPNA3O00505 521 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 AURKAO14965 403 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 SYNCRIPO60506 623 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 RNASEH1O60930 286 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ADAM23O75077 832 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 KLF8O95600 359 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 HOXB2P14652 356 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 TIMP2P16035 220 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 CSRP1P21291 193 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 GCAP28676 217 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 VIPR1P32241 457 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 MMP12P39900 470 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 HADHAP40939 763 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ABL2P42684 1182 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 DGKEP52429 567 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 GPS2Q13227 327 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 EFTUD2Q15029 972 aaKnown RBP eCLIP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 C2orf27AQ580R0 203 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 EOGTQ5NDL2 527 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF776Q68DI1 518 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 DPPA4Q7L190 304 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ARMCX6Q7L4S7 300 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 LYSMD3Q7Z3D4 306 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 SLC26A11Q86WA9 606 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 RAVER1Q8IY67 606 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 UNC5BQ8IZJ1 945 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 CAMKK1Q8N5S9 505 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 TXNDC5Q8NBS9 432 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 GABPB2Q8TAK5 448 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 SCG3Q8WXD2 468 aaKnown RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 COL26A1Q96A83 441 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 RAB7BQ96AH8 199 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 FAM131CQ96AQ9 280 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ARRDC3Q96B67 414 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 PGM2Q96G03 612 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 SGSM3Q96HU1 749 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 BBC3Q96PG8 261 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 PAFAH2Q99487 392 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 FAM167BQ9BTA0 163 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 GPR63Q9BZJ6 419 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ZFYVE1Q9HBF4 777 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 PCDH12Q9NPG4 1184 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 C20orf96Q9NUD7 363 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 TMEM74BQ9NUR3 256 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 ZFATQ9P243 1243 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 PSMC3IPQ9P2W1 217 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 NFKBIL1Q9UBC1 381 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-212ENST00000613856 B4GALT6Q9UBX8 382 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 MMP17Q9ULZ9 603 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 KCTD3Q9Y597 815 aa11.41□□□□□ -0.58
SLIRP-212ENST00000613856 PCDH15Q96QU1 1955 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CCDC78A2IDD5 438 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CXorf49A8MYA2 514 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PSMD11O00231 422 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 STX7O15400 261 aaKnown RBP11.4□□□□□ -0.58
SLIRP-212ENST00000613856 RHOBTB1O94844 696 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 VAPBO95292 243 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 APBB3O95704 486 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 IL1BP01584 269 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 MYZAPP0CAP1 466 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 ERVK-10P10266 1014 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 C5AR1P21730 350 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 LHCGRP22888 699 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 XPAP23025 273 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-212ENST00000613856 WASP42768 502 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PSMD8P48556 350 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 ARSDP51689 593 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 NEK3P51956 506 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 STC1P52823 247 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 COPAP53621 1224 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PRAMEP78395 509 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 ELP6Q0PNE2 266 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CST6Q15828 149 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 TNFAIP8L3Q5GJ75 292 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 TEDDM1Q5T9Z0 273 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 AGBL2Q5U5Z8 902 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 LRRC66Q68CR7 880 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 ANO7Q6IWH7 933 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms