RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 KDM7AQ6ZMT4 941 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 PHYKPLQ8IUZ5 450 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 OR56A4Q8NGH8 313 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 DTX3LQ8TDB6 740 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 BTN2A2Q8WVV5 523 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 HIC2Q96JB3 615 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 RANBP9Q96S59 729 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 IL26Q9NPH9 171 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 TM7SF3Q9NS93 570 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 KLQ9UEF7 1012 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 ZNF292O60281 2723 aa13.19□□□□□ -0.3
MDC1-209ENST00000613547 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 PTPRZ1P23471 2315 aaPredicted RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CTAGE15A4D2H0 777 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 C4orf47A7E2U8 309 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 DNALI1O14645 258 aaPredicted RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 TNFRSF10CO14798 259 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 INPP4BO15327 924 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 LDB2O43679 373 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 GDF9O60383 454 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 RASGRP1O95267 797 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 ASMTLO95671 621 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CSF2P04141 144 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CTAGE8P0CG41 777 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 NME1P15531 152 aaKnown RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 RXRGP48443 463 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 ZNF140P52738 457 aaPredicted RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 MSLNQ13421 630 aaPredicted RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 PCID2Q5JVF3 399 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 IZUMO3Q5VZ72 239 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 ARMC3Q5W041 872 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 FAM151BQ6UXP7 276 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CTAGE6Q86UF2 777 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 HOOK3Q86VS8 718 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CTAGE4Q8IX94 777 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 PHACTR4Q8IZ21 702 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 BBOF1Q8ND07 529 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 MCUQ8NE86 351 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 OR2I1PQ8NGU4 316 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 STYXQ8WUJ0 223 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 PTCD2Q8WV60 388 aaKnown RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 PEX13Q92968 403 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 SNF8Q96H20 258 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 AGAP2Q99490 1192 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 FRMD8Q9BZ67 464 aaPredicted RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 SLC13A1Q9BZW2 595 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 IL21RQ9HBE5 538 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 RXFP3Q9NSD7 469 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 MOSPD1Q9UJG1 213 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
MDC1-209ENST00000613547 KCTD3Q9Y597 815 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 PCDHGB2Q9Y5G2 931 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 VPS13AQ96RL7 3174 aa13.18□□□□□ -0.3
MDC1-209ENST00000613547 TCRBV7S3A2A0A539 114 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 EFCAB8A8MWE9 144 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 GOLGA8MH3BSY2 632 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 PCDHGA12O60330 932 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 TMEM63AO94886 807 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 SLC25A14O95258 325 aaPredicted RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 PRAMEF1O95521 474 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 SOD1P00441 154 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 JUNDP17535 347 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 ITGALP20701 1170 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 EPHA8P29322 1005 aaPredicted RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 MORF4L2Q15014 288 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 KCTD19Q17RG1 926 aaPredicted RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 DNTTIP2Q5QJE6 756 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 PRAMEF14Q5SWL7 426 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 TPRG1LQ5T0D9 272 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 RNASEH2BQ5TBB1 312 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 ANKRD22Q5VYY1 191 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 HID1Q8IV36 788 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 OR13C4Q8NGS5 318 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 GDAP1Q8TB36 358 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 GLYATL1Q969I3 302 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 DNAJC1Q96KC8 554 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 TTC25Q96NG3 672 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 VPS35Q96QK1 796 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 TRIM51Q9BSJ1 452 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 LGR4Q9BXB1 951 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 TRIM31Q9BZY9 425 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 ZCCHC2Q9C0B9 1178 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 RAB17Q9H0T7 212 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 NLE1Q9NVX2 485 aaPredicted RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 VPS18Q9P253 973 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 SPASTQ9UBP0 616 aa13.17□□□□□ -0.3
MDC1-209ENST00000613547 APOBEC3BQ9UH17 382 aaKnown RBP13.17□□□□□ -0.3
MDC1-209ENST00000613547 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms