RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 A0A0U1RQJ8 604 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ASB14A6NK59 587 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 FABP1P07148 127 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RBP3P10745 1247 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ITGA6P23229 1130 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 EEF1A1P68104 462 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 EEF1A2Q05639 463 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZMYND11Q15326 602 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 EEF1A1P5Q5VTE0 462 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ANGEL2Q5VTE6 544 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZZZ3Q8IYH5 903 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KATNAL2Q8IYT4 538 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KCT2Q8NC54 265 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 DPYSL5Q9BPU6 564 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RPF2Q9H7B2 306 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZSCAN32Q9NX65 697 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SPASTQ9UBP0 616 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ALS2Q96Q42 1657 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PNMA6FA0A0J9YX94 578 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF254O75437 659 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ADAMTS2O95450 1211 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ITGB1P05556 798 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 AKT1P31749 480 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CTSKP43235 329 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RAPSNQ13702 412 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CDONQ4KMG0 1287 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ANKRD22Q5VYY1 191 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ILDR1Q86SU0 546 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 GPALPP1Q8IXQ4 340 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RNF148Q8N7C7 305 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZSCAN1Q8NBB4 408 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ULK4Q96C45 1275 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MBOAT7Q96N66 472 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SLC9A7Q96T83 725 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 IER2Q9BTL4 223 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 NCANO14594 1321 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TRPM3Q9HCF6 1732 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 IFRD1O00458 451 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PRMT5O14744 637 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 BBOX1O75936 387 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 AP2A2O94973 939 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MYBP10242 640 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 IL6STP40189 918 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 OPRL1P41146 370 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CUL2Q13617 745 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 DNAJC14Q6Y2X3 702 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TBCDQ9BTW9 1192 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 DNAJC18Q9H819 358 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CYP3A43Q9HB55 503 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 POLRMTO00411 1230 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 LCP1P13796 627 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RPS12P25398 132 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MATKP42679 507 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 ZNF169Q14929 603 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PPHLN1Q8NEY8 458 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PTERQ96BW5 349 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RIPOR3Q96MK2 946 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SERPINB11Q96P15 392 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 WDR11Q9BZH6 1224 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 KLHL21Q9UJP4 597 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MGAT4BQ9UQ53 548 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 MAN2B2Q9Y2E5 1009 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TTLL8A6PVC2 850 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 NRP2O60462 931 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 FADS2O95864 444 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RLN1P04808 185 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 SLC7A2P52569 658 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 TFAMQ00059 246 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 CDC20Q12834 499 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RNASEH2BQ5TBB1 312 aaKnown RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 RPL13AP3Q6NVV1 102 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 DPP8Q6V1X1 898 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-213ENST00000613099 LRRC57Q8N9N7 239 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 FAM167AQ96KS9 214 aa4.94□□□□□ -1.62
VPS13D-213ENST00000613099 PPEF2O14830 753 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CHMP24386 653 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ETFBP38117 255 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 MNDAP41218 407 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ITKQ08881 620 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 KRT33BQ14525 404 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 EIF2S3LQ2VIR3 472 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 MGAT5BQ3V5L5 792 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 HEXIM2Q96MH2 286 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 RDH12Q96NR8 316 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 GFM1Q96RP9 751 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 MRPL57Q9BQC6 102 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 KRCC1Q9NPI7 259 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 AFF4Q9UHB7 1163 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 JAG2Q9Y219 1238 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ANKRD12Q6UB98 2062 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 A0A1B0GVM2 712 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 ERN1O75460 977 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 SNX4O95219 450 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 GUCA1CO95843 209 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CTRB1P17538 263 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CTRB2Q6GPI1 263 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CMTR2Q8IYT2 770 aaKnown RBP4.93□□□□□ -1.62
VPS13D-213ENST00000613099 CCDC24Q8N4L8 307 aa4.93□□□□□ -1.62
VPS13D-213ENST00000613099 NKX2-3Q8TAU0 364 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms