RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PDAP1Q13442 181 aaKnown RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 LAMB3Q13751 1172 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ACBD5Q5T8D3 534 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 FBXL22Q6P050 247 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 LARP4Q71RC2 724 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDH1-213ENST00000612417 SPATA24Q86W54 205 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 TCEAL8Q8IYN2 117 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 AHI1Q8N157 1196 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 GPR150Q8NGU9 434 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PHF21BQ96EK2 531 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 DUS3LQ96G46 650 aaKnown RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 RPRD1AQ96P16 312 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 RAD9AQ99638 391 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ZBP1Q9H171 429 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 SPAG4Q9NPE6 437 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 IRAK4Q9NWZ3 460 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 PLK2Q9NYY3 685 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 ADA2Q9NZK5 511 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 UXTQ9UBK9 157 aaPredicted RBP14.67□□□□□ -0.06
CDH1-213ENST00000612417 FIS1Q9Y3D6 152 aa14.67□□□□□ -0.06
CDH1-213ENST00000612417 E7ENX8 843 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 COCHO43405 550 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 CNPP09543 421 aaKnown RBP14.66□□□□□ -0.06
CDH1-213ENST00000612417 CTSAP10619 480 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 SUOXP51687 545 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 HERVK_113P63132 956 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 PPP1R3AQ16821 1122 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 PARP15Q460N3 678 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 AGKQ53H12 422 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 GPR158Q5T848 1215 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 IRAK1BP1Q5VVH5 260 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 ZNF354CQ86Y25 554 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 HERC6Q8IVU3 1022 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 PGBD5Q8N414 524 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 OR6P1Q8NGX9 317 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 MYRFLQ96LU7 910 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 ASB2Q96Q27 587 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 ERVK-6Q9BXR3 956 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 ALG9Q9H6U8 611 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 POPDC3Q9HBV1 291 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 UBAP1Q9NZ09 502 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 MARCH4Q9P2E8 410 aaPredicted RBP14.66□□□□□ -0.06
CDH1-213ENST00000612417 CD300AQ9UGN4 299 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 RIMKLBQ9ULI2 386 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 ANAPC1Q9H1A4 1944 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 PLXNA4Q9HCM2 1894 aa14.66□□□□□ -0.06
CDH1-213ENST00000612417 DRGXA6NNA5 263 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 GPC4O75487 556 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 RNASEH2AO75792 299 aaKnown RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 EPOP01588 193 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 RHDQ02161 417 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 RPS27LQ71UM5 84 aaKnown RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 CLP1Q92989 425 aaKnown RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 IGSF8Q969P0 613 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 TRMT2BQ96GJ1 504 aaKnown RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 FEM1CQ96JP0 617 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 ZNF696Q9H7X3 374 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 POLR3BQ9NW08 1133 aaPredicted RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 CCDC167Q9P0B6 97 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 COMMD3-BMI1R4GMX3 469 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 LCHNA4D1U4 455 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 TGM5O43548 720 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 LILRB3O75022 631 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 FGF1P05230 155 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 IRF1P10914 325 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 HLA-DPA1P20036 260 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 CTNNB1P35222 781 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 KCNC1P48547 511 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 SERINC3Q13530 473 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 UGT3A2Q3SY77 523 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 UNC50Q53HI1 259 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 C1QTNF12Q5T7M4 302 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 PAOXQ6QHF9 649 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 ITIH5Q86UX2 942 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 CIR1Q86X95 450 aaPredicted RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 PCDH20Q8N6Y1 951 aaKnown RBP14.65□□□□□ -0.06
CDH1-213ENST00000612417 FAM156AQ8NDB6 213 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 PTERQ96BW5 349 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 C19orf60Q96EN9 201 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 TMEM181Q9P2C4 612 aa14.65□□□□□ -0.06
CDH1-213ENST00000612417 TCRBV3S1A0A5B6 114 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 C2orf78A6NCI8 922 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 NRP2O60462 931 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 RAMP2O60895 175 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 SUPT7LO94864 414 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 TNFAIP8O95379 198 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 FGF4P08620 206 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 LINC00271P0C7V0 271 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 CD1DP15813 335 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 TCN1P20061 433 aaPredicted RBP14.64□□□□□ -0.07
CDH1-213ENST00000612417 TACR2P21452 398 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 SLC11A2P49281 568 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 YBEYP58557 167 aaPredicted RBP14.64□□□□□ -0.07
CDH1-213ENST00000612417 TIAL1Q01085 375 aaKnown RBP eCLIP14.64□□□□□ -0.07
CDH1-213ENST00000612417 POLD3Q15054 466 aaPredicted RBP14.64□□□□□ -0.07
CDH1-213ENST00000612417 SAMD4BQ5PRF9 694 aaKnown RBP14.64□□□□□ -0.07
CDH1-213ENST00000612417 IL23RQ5VWK5 629 aa14.64□□□□□ -0.07
CDH1-213ENST00000612417 NADSYN1Q6IA69 706 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms