RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 LINC01465Q8N7H1 131 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 PHF10Q8WUB8 498 aaKnown RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 AFG1LQ8WV93 481 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 BHMTQ93088 406 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 VPS33AQ96AX1 596 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 HEXIM2Q96MH2 286 aaKnown RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 MRPL57Q9BQC6 102 aaKnown RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 OR2B2Q9GZK3 357 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 MARCH7Q9H992 704 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 RPF1Q9H9Y2 349 aaKnown RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 NEK6Q9HC98 313 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 UGT2A1Q9Y4X1 527 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 H0Y858 1186 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 SCO2O43819 266 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 INSRRP14616 1297 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 ATP5F1P24539 256 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 SHMT2P34897 504 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 ALDH3A2P51648 485 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 FOXM1Q08050 763 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 GALNT1Q10472 559 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 SELPLGQ14242 412 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 PPP1R3AQ16821 1122 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 RNF135Q8IUD6 432 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 CCDC126Q96EE4 140 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 ELMO2Q96JJ3 720 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 RDH12Q96NR8 316 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 GPR78Q96P69 363 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 OCSTAMPQ9BR26 566 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 C17orf80Q9BSJ5 609 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 CDT1Q9H211 546 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 CYP3A43Q9HB55 503 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 TLR9Q9NR96 1032 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 IARS2Q9NSE4 1012 aaKnown RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 CXXC1Q9P0U4 656 aaPredicted RBP11.91□□□□□ -0.5
TP53-220ENST00000610623 SNX5Q9Y5X3 404 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 EVPLQ92817 2033 aa11.91□□□□□ -0.5
TP53-220ENST00000610623 TCRBV5S2A0A599 114 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 INPP4BO15327 924 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 NADKO95544 446 aaPredicted RBP11.9□□□□□ -0.5
TP53-220ENST00000610623 AP2A1O95782 977 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 SLC6A3Q01959 620 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 CHRNEQ04844 493 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 TTC23Q5W5X9 447 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 LCLAT1Q6UWP7 414 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 PRR23CQ6ZRP0 262 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 CATSPER4Q7RTX7 472 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 PTRH1Q86Y79 214 aaKnown RBP11.9□□□□□ -0.5
TP53-220ENST00000610623 PSTKQ8IV42 348 aaKnown RBP11.9□□□□□ -0.5
TP53-220ENST00000610623 CLIP4Q8N3C7 705 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 OR9I1Q8NGQ6 314 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 RHOXF1Q8NHV9 184 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 CLIP3Q96DZ5 547 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 AURKBQ96GD4 344 aaPredicted RBP11.9□□□□□ -0.5
TP53-220ENST00000610623 CLSTN3Q9BQT9 956 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 POMKQ9H5K3 350 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 NOL6Q9H6R4 1146 aaKnown RBP11.9□□□□□ -0.5
TP53-220ENST00000610623 ANKHQ9HCJ1 492 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 CASS4Q9NQ75 786 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 CUEDC1Q9NWM3 386 aaPredicted RBP11.9□□□□□ -0.5
TP53-220ENST00000610623 HMGXB4Q9UGU5 601 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 KIAA1257Q9ULG3 409 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 PDE10AQ9Y233 779 aa11.9□□□□□ -0.5
TP53-220ENST00000610623 TOR1BO14657 336 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 NDUFS2O75306 463 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 KRT19P08727 400 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
TP53-220ENST00000610623 GPX3P22352 226 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 CXCR2P25025 360 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 NR4A2P43354 598 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 NPY2RP49146 381 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 ARSFP54793 590 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 CLCQ05315 142 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 COL19A1Q14993 1142 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 UGP2Q16851 508 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 EEF1DP3Q658K8 133 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 LARP4Q71RC2 724 aaKnown RBP eCLIP11.89□□□□□ -0.513e-11■□□□□ 10.4
TP53-220ENST00000610623 ADCK1Q86TW2 530 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 C11orf74Q86VG3 221 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 ZNF567Q8N184 647 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 Q8N9G6 341 aaPredicted RBP11.89□□□□□ -0.51
TP53-220ENST00000610623 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 TXNDC5Q8NBS9 432 aaKnown RBP11.89□□□□□ -0.51
TP53-220ENST00000610623 SLC22A17Q8WUG5 538 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 MED30Q96HR3 178 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 KCTD15Q96SI1 283 aaPredicted RBP11.89□□□□□ -0.51
TP53-220ENST00000610623 DGCR6LQ9BY27 220 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 KATNBL1Q9H079 304 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 OSBPL2Q9H1P3 480 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 TRIT1Q9H3H1 467 aaKnown RBP11.89□□□□□ -0.51
TP53-220ENST00000610623 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 PCDH12Q9NPG4 1184 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
TP53-220ENST00000610623 CMTM6Q9NX76 183 aa11.89□□□□□ -0.51
TP53-220ENST00000610623 RCOR3Q9P2K3 495 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms