RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CDRT15L2A8MXV6 281 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 B4DLN1 442 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 ATP2A1O14983 1001 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 GPC4O75487 556 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 TPPPO94811 219 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 EGFP01133 1207 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 HIST1H2ABP04908 130 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 ACTN1P12814 892 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 HIST1H2ADP20671 130 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 UBA1P22314 1058 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 THBS3P49746 956 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 MRPL12P52815 198 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 MRPS34P82930 218 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 TRAF2Q12933 501 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 PLCB4Q15147 1175 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 PNLIPRP3Q17RR3 467 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 KCTD18Q6PI47 426 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 C16orf54Q6UWD8 224 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 CFAP77Q6ZQR2 320 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 HIST3H2AQ7L7L0 130 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 FBXL14Q8N1E6 418 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 CCDC89Q8N998 374 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 OR8K5Q8NH50 307 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 RND1Q92730 232 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 JAKMIP2Q96AA8 810 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 MOAP1Q96BY2 351 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 FEM1CQ96JP0 617 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 MARK4Q96L34 752 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 TINAGQ9UJW2 476 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 FBXW11Q9UKB1 542 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
SMCHD1-213ENST00000609587 A0A0U1RQJ8 604 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 SOCS6O14544 535 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 OGG1O15527 345 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 FIBPO43427 364 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 PLRG1O43660 514 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 STARD3NLO95772 234 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 PRSS2P07478 247 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 ANXA7P20073 488 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 RRM1P23921 792 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 PON1P27169 355 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 ACSL1P33121 698 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 MFAP4P55083 255 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 NANOS2P60321 138 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CSNK2A1P68400 391 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 FOXM1Q08050 763 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 DDR1Q08345 913 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 HLFQ16534 295 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CTF1Q16619 201 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 PAPPA-AS1Q5QFB9 102 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CFAP58Q5T655 872 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 FAM69BQ5VUD6 431 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 DUS1LQ6P1R4 473 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 WDR73Q6P4I2 378 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CLEC17AQ6ZS10 378 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 ENOSF1Q7L5Y1 443 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 SDCCAG8Q86SQ7 713 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 FOXRED2Q8IWF2 684 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CSNK2A3Q8NEV1 391 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 MIB2Q96AX9 1013 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 EGLN2Q96KS0 407 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 NTPCRQ9BSD7 190 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 MXD3Q9BW11 206 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 C1QTNF1Q9BXJ1 281 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 PIGMQ9H3S5 423 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 COPG2Q9UBF2 871 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 OR14J1Q9UGF5 321 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 RPS6KA6Q9UK32 745 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 CMAHPQ9Y471 501 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 SNX9Q9Y5X1 595 aa4.29□□□□□ -1.72
SMCHD1-213ENST00000609587 KANSL1LA0AUZ9 987 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 M0QZ24 198 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 SPINT2O43291 252 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 SMAD6O43541 496 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAGE7O76087 117 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 BEST1O76090 585 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 HSP90AA1P07900 732 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAGE12FP0CL80 117 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAGE12GP0CL81 117 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAGE12IP0CL82 117 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 ITGB8P26012 769 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 BDKRB2P30411 391 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 SSTR2P30874 369 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 EIF2DP41214 584 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 RAD52P43351 418 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 HTR6P50406 440 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 HNRNPH2P55795 449 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 BNC1Q01954 994 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 STK4Q13043 487 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAGE1Q13065 139 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAGE4Q13068 117 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 TRAF3Q13114 568 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 DHX34Q14147 1143 aaKnown RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 KCTD2Q14681 263 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 ZNF805Q5CZA5 627 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms