RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SNX3O60493 162 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CLDN7O95471 211 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CTSLP07711 333 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RBP1P09455 135 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PKMP14618 531 aaKnown RBP12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF7P17097 686 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BPIP17213 487 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ACRV1P26436 265 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GKP32189 559 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SERPINB5P36952 375 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MMP12P39900 470 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SPINT3P49223 89 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NAA20P61599 178 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CREB5Q02930 508 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KDSRQ06136 332 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PCLAFQ15004 111 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ACAP2Q15057 778 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZSCAN26Q16670 478 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZRANB3Q5FWF4 1079 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF789Q5FWF6 425 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ARSIQ5FYB1 569 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RBM20Q5T481 1227 aaKnown RBP12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FAM46CQ5VWP2 391 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LRRC66Q68CR7 880 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PSAPL1Q6NUJ1 521 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SERPINA13PQ6UXR4 307 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF765Q7L2R6 523 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CYP2U1Q7Z449 544 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RALGPS2Q86X27 583 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CEP97Q8IW35 865 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KIRREL3Q8IZU9 778 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OR6Y1Q8NGX8 325 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RHEBL1Q8TAI7 183 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HEXDCQ8WVB3 486 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SORCS1Q8WY21 1168 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PBXIP1Q96AQ6 731 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CHFRQ96EP1 664 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GPR78Q96P69 363 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HDAC8Q9BY41 377 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PITPNM3Q9BZ71 974 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 P2RY12Q9H244 342 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MRPL46Q9H2W6 279 aaKnown RBP12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CAB39LQ9H9S4 337 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 IL26Q9NPH9 171 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GTSE1Q9NYZ3 720 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TMEM216Q9P0N5 145 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 B4GALT6Q9UBX8 382 aa12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OAS3Q9Y6K5 1087 aaKnown RBP12.23□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 IGLV3-16A0A075B6K0 115 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C16orf96A6NNT2 1141 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TMEM114B3SHH9 223 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TARM1B6A8C7 271 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 EIF3FO00303 357 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 EBAG9O00559 213 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CCL22O00626 93 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BUD23O43709 281 aaKnown RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SNNO75324 88 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 VPS26AO75436 327 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SERPINE1P05121 402 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CPA3P15088 417 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TIMP2P16035 220 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF37AP17032 561 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LHCGRP22888 699 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 XPAP23025 273 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HK2P52789 917 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ATP6V0D1P61421 351 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PTSQ03393 145 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CCDC15Q0P6D6 951 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CAMK2GQ13555 558 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PTPRCAPQ14761 206 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HSF5Q4G112 596 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PPM1JQ5JR12 505 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LRRC8EQ6NSJ5 796 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF549Q6P9A3 640 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZYG11AQ6WRX3 759 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TRMT11Q7Z4G4 463 aaKnown RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NLRP8Q86W28 1048 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PIANPQ8IYJ0 282 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NXPE1Q8N323 547 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NKAPQ8N5F7 415 aaKnown RBP12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ACVR1CQ8NER5 493 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BIRC8Q96P09 236 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OLFM1Q99784 485 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 P2RY13Q9BPV8 354 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZSCAN5AQ9BUG6 496 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TSSK1BQ9BXA7 367 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FAM96AQ9H5X1 160 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LATS2Q9NRM7 1088 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FGFR1OP2Q9NVK5 253 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 THAP1Q9NVV9 213 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KLHL14Q9P2G3 628 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GNPTGQ9UJJ9 305 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LAMA3Q16787 3333 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BPTFQ12830 3046 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 QSOX1O00391 747 aa12.21□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 AREL1O15033 823 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms