RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 CCDC112Q8NEF3 446 aa16.73■□□□□ 0.27
CCDC12-210ENST00000604181 ASPSCR1Q9BZE9 553 aa16.73■□□□□ 0.27
CCDC12-210ENST00000604181 GPN2Q9H9Y4 310 aaPredicted RBP16.73■□□□□ 0.27
CCDC12-210ENST00000604181 KCTD5Q9NXV2 234 aa16.73■□□□□ 0.27
CCDC12-210ENST00000604181 MRPS18BQ9Y676 258 aaKnown RBP16.73■□□□□ 0.27
CCDC12-210ENST00000604181 OAS3Q9Y6K5 1087 aaKnown RBP16.73■□□□□ 0.27
CCDC12-210ENST00000604181 A0A1W2PQ67 120 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 INPP4BO15327 924 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 ZW10O43264 779 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 FZD6O60353 706 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 HSPA9P38646 679 aaKnown RBP16.72■□□□□ 0.27
CCDC12-210ENST00000604181 RAB15P59190 212 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 GPLD1P80108 840 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 NFATC2Q13469 925 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 ARMC12Q5T9G4 340 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 POLNQ7Z5Q5 900 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 NLGN4XQ8N0W4 816 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 LZTR1Q8N653 840 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 NLGN4YQ8NFZ3 816 aaPredicted RBP16.72■□□□□ 0.27
CCDC12-210ENST00000604181 C9orf43Q8TAL5 461 aaPredicted RBP16.72■□□□□ 0.27
CCDC12-210ENST00000604181 AP2M1Q96CW1 435 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 COX14Q96I36 57 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 CSPG4P5Q96PW8 444 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 SLC38A3Q99624 504 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 DPYSL5Q9BPU6 564 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 ZMYND15Q9H091 742 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 TBC1D29Q9UFV1 150 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 CNOT6Q9ULM6 557 aaKnown RBP16.72■□□□□ 0.27
CCDC12-210ENST00000604181 PLAAQ9Y263 795 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
CCDC12-210ENST00000604181 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 K7EM74 188 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 DNAJC6O75061 913 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 RNF8O76064 485 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 ATP1A1P05023 1023 aaKnown RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 DESP17661 470 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 NR1D1P20393 614 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 F8A1P23610 371 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 NCAPHQ15003 741 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 DEFB109BQ30KR1 87 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 USP45Q70EL2 814 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 ZNF571Q7Z3V5 609 aaPredicted RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 PSTKQ8IV42 348 aaKnown RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 ABHD17AQ96GS6 310 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 AHCYL2Q96HN2 611 aaKnown RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 CATSPER2Q96P56 530 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 WDR24Q96S15 920 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 RIOK2Q9BVS4 552 aaKnown RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 NT5MQ9NPB1 228 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 ANAPC2Q9UJX6 822 aa16.71■□□□□ 0.27
CCDC12-210ENST00000604181 TMEM184BQ9Y519 407 aaPredicted RBP16.71■□□□□ 0.27
CCDC12-210ENST00000604181 A6NCN8 305 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 H3BRJ5 948 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC12-210ENST00000604181 STK17BO94768 372 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 DLGAP3O95886 979 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 FTLP02792 175 aaPredicted RBP16.7■□□□□ 0.26
CCDC12-210ENST00000604181 ATP1A3P13637 1013 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 MMP13P45452 471 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 PPM1FP49593 454 aaPredicted RBP16.7■□□□□ 0.26
CCDC12-210ENST00000604181 STC1P52823 247 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 HHEXQ03014 270 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
CCDC12-210ENST00000604181 GALNT13Q8IUC8 556 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC12-210ENST00000604181 OR10G6Q8NH81 332 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 STARD8Q92502 1023 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 NCSTNQ92542 709 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 HSPH1Q92598 858 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 ZWILCHQ9H900 591 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 CHMP5Q9NZZ3 219 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 KLHL3Q9UH77 587 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 KCNK6Q9Y257 313 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 MAN2B2Q9Y2E5 1009 aa16.7■□□□□ 0.26
CCDC12-210ENST00000604181 A0A0J9YYE9 177 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 ASMTLO95671 621 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 PRLP01236 227 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 TRBC1P01850 177 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 RARAP10276 462 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 ZNF28P17035 718 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 MAP4P27816 1152 aaKnown RBP16.69■□□□□ 0.26
CCDC12-210ENST00000604181 ZNF135P52742 658 aaPredicted RBP16.69■□□□□ 0.26
CCDC12-210ENST00000604181 MARC1Q5VT66 337 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 C16orf46Q6P387 395 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 IYDQ6PHW0 289 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 WDR74Q6RFH5 385 aaPredicted RBP16.69■□□□□ 0.26
CCDC12-210ENST00000604181 ATPAF2Q8N5M1 289 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 TEX26Q8N6G2 289 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 TEFMQ96QE5 360 aaKnown RBP16.69■□□□□ 0.26
CCDC12-210ENST00000604181 TBC1D10AQ9BXI6 508 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 PCDH18Q9HCL0 1135 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 FBXO8Q9NRD0 319 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCDC12-210ENST00000604181 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 SIDT1Q9NXL6 827 aaKnown RBP16.69■□□□□ 0.26
CCDC12-210ENST00000604181 ZNHIT2Q9UHR6 403 aa16.69■□□□□ 0.26
CCDC12-210ENST00000604181 UNC79Q9P2D8 2635 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms