RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 TARDBPQ13148 414 aaKnown RBP eCLIP23.61■■□□□ 1.371e-7■■■■□ 19.9
SSX2IP-209ENST00000603677 GALNT3Q14435 633 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 PTPRRQ15256 657 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 LLGL1Q15334 1064 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 KDELC1Q6UW63 502 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 EFL1Q7Z2Z2 1120 aaKnown RBP23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 PLEKHG4BQ96PX9 1271 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 C19orf43Q9BQ61 176 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 FRMD8P1Q9BZ68 369 aaPredicted RBP23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 GPR63Q9BZJ6 419 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 TMEM168Q9H0V1 697 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 CD84Q9UIB8 345 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 MOSPD1Q9UJG1 213 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 ASXL3Q9C0F0 2248 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 ASPMQ8IZT6 3477 aa23.61■■□□□ 1.37
SSX2IP-209ENST00000603677 KMT2BQ9UMN6 2715 aaPredicted RBP23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 CPED1A4D0V7 1026 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 PMPCBO75439 489 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 PTMAP06454 111 aaKnown RBP23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 GLB1P16278 677 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 RBL1P28749 1068 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 PRPSAP1Q14558 356 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 PCSK7Q16549 785 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 GUSBP11Q6P575 273 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 LYSMD3Q7Z3D4 306 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 PROSER1Q86XN7 944 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 FAM46DQ8NEK8 389 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 GBA3Q9H227 469 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 MRPL40Q9NQ50 206 aaKnown RBP23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 RSPH14Q9UHP6 348 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 APPL1Q9UKG1 709 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 SUFUQ9UMX1 484 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 ZNF711Q9Y462 761 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 CACNA1BQ00975 2339 aa23.6■■□□□ 1.37
SSX2IP-209ENST00000603677 MYLKQ15746 1914 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 DDX3YO15523 660 aaKnown RBP23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 NUDT21O43809 227 aaKnown RBP23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 FGF1P05230 155 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 CCDC175P0C221 793 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 DARS2Q6PI48 645 aaKnown RBP23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 LRRC8AQ8IWT6 810 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 TRAM1L1Q8N609 369 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 MRGPRX2Q96LB1 330 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 SMIM14Q96QK8 99 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 WDR24Q96S15 920 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 ZMIZ1Q9ULJ6 1067 aa23.59■■□□□ 1.37
SSX2IP-209ENST00000603677 TMX2-CTNND1H3BSU7 103 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 KLF1Q13351 362 aaPredicted RBP23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 SLC1A5Q15758 541 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 CLPPQ16740 277 aaPredicted RBP23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 C17orf82Q86X59 251 aaPredicted RBP23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 LSMEM2Q8N112 164 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 FSD1LQ9BXM9 530 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 CAAP1Q9H8G2 361 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 GULP1Q9UBP9 304 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 TRIM10Q9UDY6 481 aa23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 FEZ2Q9UHY8 353 aaPredicted RBP23.58■■□□□ 1.37
SSX2IP-209ENST00000603677 ARHGEF17Q96PE2 2063 aaPredicted RBP23.58■■□□□ 1.36
SSX2IP-209ENST00000603677 RP1P56715 2156 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 FAM149AA5PLN7 773 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 C5orf60A6NFR6 353 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 CELA2BP08218 269 aaPredicted RBP23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 ADCY8P40145 1251 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 C14orf28Q4W4Y0 310 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 PYCR3Q53H96 274 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 ANKRD20A2Q5SQ80 823 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 ANKRD20A1Q5TYW2 823 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 ANKRD20A3Q5VUR7 823 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 RBM44Q6ZP01 1051 aaKnown RBP23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 RFLNAQ6ZTI6 216 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 B4GALNT4Q76KP1 1039 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 KDELC2Q7Z4H8 507 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 GALNT13Q8IUC8 556 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 EID2BQ96D98 161 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 OXNAD1Q96HP4 312 aaPredicted RBP23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 SPATA13Q96N96 652 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 OR2M4Q96R27 311 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 CARD9Q9H257 536 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 DPEP2Q9H4A9 486 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 CNOT6Q9ULM6 557 aaKnown RBP23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 CAPN6Q9Y6Q1 641 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 ACACAQ13085 2346 aa23.57■■□□□ 1.36
SSX2IP-209ENST00000603677 A0A0U1RQS6 177 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 KCNN4O15554 427 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 FTCDO95954 541 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 FUCA1P04066 466 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 GNPDA1P46926 289 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 PDE1BQ01064 536 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 HLTFQ14527 1009 aaKnown RBP eCLIP23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 SIRPB2Q5JXA9 342 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 ZNF569Q5MCW4 686 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 CERCAMQ5T4B2 595 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 KCTD16Q68DU8 428 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 KLHDC8BQ8IXV7 354 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 KYQ8NBH2 561 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 ALS2CR12Q96Q35 445 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 VPS35Q96QK1 796 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 AGAP2Q99490 1192 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 CCDC3Q9BQI4 270 aa23.56■■□□□ 1.36
SSX2IP-209ENST00000603677 HERPUD2Q9BSE4 406 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms