RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 HSMCR30P0CW71 290 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PRKAR1AP10644 381 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CST5P28325 142 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 MECP2P51608 486 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ERVFC1P60507 584 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 YPEL5P62699 121 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ASIC1P78348 528 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ADAM17P78536 824 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF33BQ06732 778 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CDC20Q12834 499 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PEX6Q13608 980 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ARHGAP19Q14CB8 494 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TRADDQ15628 312 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TAZQ16635 292 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 NFIL3Q16649 462 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 FSCN1Q16658 493 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TXNRD1Q16881 649 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SYT16Q17RD7 645 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TIGD2Q4W5G0 525 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 UBAP2Q5T6F2 1119 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KCTD11Q693B1 232 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PRR23CQ6ZRP0 262 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 USP50Q70EL3 339 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TRILQ7L0X0 811 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KCTD9Q7L273 389 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 AMZ2Q86W34 360 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KSR1Q8IVT5 923 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KIAA2013Q8IYS2 634 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ELMOD2Q8IZ81 293 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 BPIFCQ8NFQ6 507 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 OR13C2Q8NGS9 318 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CHPT1Q8WUD6 406 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 THAP4Q8WY91 577 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC9A6Q92581 669 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC51Q96ER9 411 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 C11orf24Q96F05 449 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 C1orf159Q96HA4 380 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 OPALINQ96PE5 141 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ELF4Q99607 663 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR18Q9BV38 432 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 MRPL37Q9BZE1 423 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR62Q9BZJ7 368 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TM6SF1Q9BZW5 370 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ZC3H12CQ9C0D7 883 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 RNF41Q9H4P4 317 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 AGPAT5Q9NUQ2 364 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PNPOQ9NVS9 261 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KLHL14Q9P2G3 628 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TBX20Q9UMR3 447 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 DAPP1Q9UN19 280 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CDC14AQ9UNH5 594 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 MRPS2Q9Y399 296 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 STRAPQ9Y3F4 350 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CACNG2Q9Y698 323 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PITPNM2Q9BZ72 1349 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TARM1B6A8C7 271 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TO15178 435 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CLOCKO15516 846 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 MSCO60682 206 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ADAM11O75078 769 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TMEM63AO94886 807 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 MFN2O95140 757 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ESRRBO95718 433 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ONECUT2O95948 504 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CKMP06732 381 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KRT7P08729 469 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ITGAXP20702 1163 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KCNA5P22460 613 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PTAFRP25105 342 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PSMA5P28066 241 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 GRK4P32298 578 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ECI1P42126 302 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KCNJ5P48544 419 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 GRIN1Q05586 938 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 FCHO2Q0JRZ9 810 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 DUSP4Q13115 394 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TCP11X2Q5H9J9 407 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 LDLRAP1Q5SW96 308 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 LIN9Q5TKA1 542 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 KANK2Q63ZY3 851 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ARHGAP17Q68EM7 881 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ETFRF1Q6IPR1 90 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 GDF6Q6KF10 455 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PSAPL1Q6NUJ1 521 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 STOX1Q6ZVD7 989 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SYT13Q7L8C5 426 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF572Q7Z3I7 529 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TC2NQ8N9U0 490 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 FSIP1Q8NA03 581 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 C8orf58Q8NAV2 365 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 NEIL1Q96FI4 390 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 FAR2Q96K12 515 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF317Q96PQ6 595 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 COL25A1Q9BXS0 654 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 CLPBQ9H078 707 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SIAEQ9HAT2 523 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 LZTFL1Q9NQ48 299 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 DDX4Q9NQI0 724 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms