RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 DCAKDQ8WVC6 231 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 PIH1D2Q8WWB5 315 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 ASB12Q8WXK4 309 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 VOPP1Q96AW1 172 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 TADA1Q96BN2 335 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 CENPTQ96BT3 561 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 MCCC1Q96RQ3 725 aaPredicted RBP10.07□□□□□ -0.8
UPF1-213ENST00000601981 TBL1YQ9BQ87 522 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 WRAP53Q9BUR4 548 aaKnown RBP10.07□□□□□ -0.8
UPF1-213ENST00000601981 SLC17A9Q9BYT1 436 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 IL22Q9GZX6 179 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 MIR1-1HGQ9H1L0 117 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 TRABDQ9H4I3 376 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SYBUQ9NX95 663 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 BFARQ9NZS9 450 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SAMD15Q9P1V8 674 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 B4GALT6Q9UBX8 382 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 ZNF180Q9UJW8 692 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 ITM2BQ9Y287 266 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 MYO15AQ9UKN7 3530 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 CACNA1EQ15878 2313 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 FRYLO94915 3013 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 C1orf232A0A0U1RR37 186 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 IQANK1A0A1B0GTG1 560 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 A0A1B0GTW7 788 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 LOC285095A0A1B0GVY8 99 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 MAGEB16A2A368 324 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PROB1E7EW31 1015 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PRAMEF26H0Y7S4 382 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
UPF1-213ENST00000601981 MAGEC1O60732 1142 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 MMP20O60882 483 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 LRP3O75074 770 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PRKCGP05129 697 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 POLBP06746 335 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 INHBAP08476 426 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 C6P13671 934 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 CTPS1P17812 591 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 ITPKAP23677 461 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 MAT2AP31153 395 aaKnown RBP10.06□□□□□ -0.8
UPF1-213ENST00000601981 ADRA1AP35348 466 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PTGER3P43115 390 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 LIG3P49916 1009 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PPP2CBP62714 309 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 RACK1P63244 317 aaKnown RBP10.06□□□□□ -0.8
UPF1-213ENST00000601981 PPP2CAP67775 309 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 CRYMQ14894 314 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 ACOX1Q15067 660 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SLC1A5Q15758 541 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 QPCTQ16769 361 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 TMEM259Q4ZIN3 620 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 CASC4Q6P4E1 433 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SLC26A11Q86WA9 606 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 LRRC6Q86X45 466 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SLC41A1Q8IVJ1 513 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 RAVER1Q8IY67 606 aaKnown RBP10.06□□□□□ -0.8
UPF1-213ENST00000601981 DNAAF3Q8N9W5 541 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 DENND6BQ8NEG7 585 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 DNASE2BQ8WZ79 361 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PIGKQ92643 395 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SERAC1Q96JX3 654 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 MRGPRX2Q96LB1 330 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 NSMCE3Q96MG7 304 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 TRIB3Q96RU7 358 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 LYSMD1Q96S90 227 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SELENOSQ9BQE4 189 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 FICDQ9BVA6 458 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 GPR63Q9BZJ6 419 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 MAGEE1Q9HCI5 957 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SSU72Q9NP77 194 aaKnown RBP10.06□□□□□ -0.8
UPF1-213ENST00000601981 AASDHPPTQ9NRN7 309 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 RAD18Q9NS91 495 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 MOCS1Q9NZB8 636 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 PKD2L2Q9NZM6 624 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 TBK1Q9UHD2 729 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 EIF2B4Q9UI10 523 aaKnown RBP10.06□□□□□ -0.8
UPF1-213ENST00000601981 GGT7Q9UJ14 662 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 IKBKGQ9Y6K9 419 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 SCN8AQ9UQD0 1980 aa10.06□□□□□ -0.8
UPF1-213ENST00000601981 FAM237BA0A1B0GVD1 139 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 IGLON5A6NGN9 336 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 NPIPB15A6NHN6 443 aaPredicted RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 TOR1BO14657 336 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 FPGTO14772 594 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 BCAT2O15382 392 aaPredicted RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 SLC31A1O15431 190 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 USP12O75317 370 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 USP1O94782 785 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 PRLP01236 227 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 IGHV4-34P06331 123 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 PYGLP06737 847 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 ALPIP09923 528 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 BRAFP15056 766 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 KRT15P19012 456 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 HNF1BP35680 557 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 MPLP40238 635 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 SERPINB9P50453 376 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 AFF3P51826 1226 aaKnown RBP10.05□□□□□ -0.8
UPF1-213ENST00000601981 SLC18A1P54219 525 aa10.05□□□□□ -0.8
UPF1-213ENST00000601981 PDE1BQ01064 536 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms