RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	AP1S1	P61966	158 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	ELOA	Q14241	798 aa	Known RBP	12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	IL11RA	Q14626	422 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	PRR30	Q53SZ7	412 aa	Predicted RBP	12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	SLC34A3	Q8N130	599 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	TTC13	Q8NBP0	860 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	THAP4	Q8WY91	577 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	CELF6	Q96J87	481 aa	Known RBP	12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	TIGD1	Q96MW7	591 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	OR6C1	Q96RD1	312 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	ACTL8	Q9H568	366 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	ZNF768	Q9H5H4	540 aa	Known RBP	12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	PDF	Q9HBH1	243 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	ZNHIT2	Q9UHR6	403 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	SLC5A6	Q9Y289	635 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	ZNF451	Q9Y4E5	1061 aa		12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.19	□□□□□ -0.46
NUP62-223	ENST00000601665	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.18	□□□□□ -0.46
NUP62-223	ENST00000601665		A0A1W2PQ67	120 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	ARGFX	A6NJG6	315 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	C21orf140	B9A014	251 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	SNX2	O60749	519 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	RASSF9	O75901	435 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	CP	P00450	1065 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	ANKRD34C	P0C6C1	535 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	TEAD1	P28347	426 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	LEPR	P48357	1165 aa	Known RBP	12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	SEPHS1	P49903	392 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	RENBP	P51606	427 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	NDST2	P52849	883 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	TPI1	P60174	286 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	NOMO3	P69849	1222 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	CHAF1B	Q13112	559 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	CHRNA6	Q15825	494 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	PYCR3	Q53H96	274 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	CPZ	Q66K79	652 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	JMJD6	Q6NYC1	403 aa	Predicted RBP	12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	CYB5D1	Q6P9G0	228 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665		Q6ZVL8	140 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	HSD11B1L	Q7Z5J1	315 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	AVL9	Q8NBF6	648 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	JOSD2	Q8TAC2	188 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	FNIP1	Q8TF40	1166 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	CT55	Q8WUE5	264 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	TCTN2	Q96GX1	697 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	C11orf70	Q9BRQ4	267 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	MFRP	Q9BY79	579 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	SIX2	Q9NPC8	291 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	SIDT1	Q9NXL6	827 aa	Known RBP	12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	PCDHGA6	Q9Y5G7	932 aa		12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.18	□□□□□ -0.46
NUP62-223	ENST00000601665	ANKRD62	A6NC57	917 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	WIPF3	A6NGB9	483 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	PSMD11	O00231	422 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	DFFA	O00273	331 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	TRAFD1	O14545	582 aa	Predicted RBP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	MME	P08473	750 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	KRT3	P12035	628 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	DES	P17661	470 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	GPD1	P21695	349 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	PAPOLA	P51003	745 aa	Known RBP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	NR6A1	Q15406	480 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	CHST15	Q7LFX5	561 aa	Predicted RBP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	NOP9	Q86U38	636 aa	Known RBP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	TRIM74	Q86UV6	250 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	PPP1R3B	Q86XI6	285 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	CENPI	Q92674	756 aa	Predicted RBP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	AP2M1	Q96CW1	435 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	SCARF2	Q96GP6	870 aa	Predicted RBP	12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	C9orf72	Q96LT7	481 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	TGM7	Q96PF1	710 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	HERPUD2	Q9BSE4	406 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	SELENOO	Q9BVL4	669 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	TBC1D10A	Q9BXI6	508 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	ING2	Q9H160	280 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	LRRC19	Q9H756	370 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	LHX9	Q9NQ69	397 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	CD84	Q9UIB8	345 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	ZDHHC9	Q9Y397	364 aa		12.17	□□□□□ -0.46
NUP62-223	ENST00000601665	MN1	Q10571	1320 aa	Predicted RBP	12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	KIR2DS5	A0A0G2JLQ3	304 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665		A0A0G2JNG1	304 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	KIR2DS3	K7RE56	304 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	DAPK3	O43293	454 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	HNRNPR	O43390	633 aa	Known RBP	12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	SOCS5	O75159	536 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	SPAG6	O75602	509 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	EML2	O95834	649 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	PYGL	P06737	847 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	AMD1	P17707	334 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	GFER	P55789	205 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	RPS15	P62841	145 aa	Known RBP	12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	SH3BP2	P78314	561 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	ZNF235	Q14590	738 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	RFTN1	Q14699	578 aa	Predicted RBP	12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	KIR2DS5	Q14953	304 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	UGT8	Q16880	541 aa		12.16	□□□□□ -0.46
NUP62-223	ENST00000601665	TPD52L1	Q16890	204 aa	Predicted RBP	12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms