RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 DPYSL3Q14195 570 aa17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 NKD1Q969G9 470 aa17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 TSGA13Q96PP4 275 aa17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 TAAR9Q96RI9 348 aa17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 POLR1EQ9GZS1 481 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 CDH19Q9H159 772 aa17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 PCDHB11Q9Y5F2 797 aa17.89■□□□□ 0.45
CHMP2A-208ENST00000601220 ZW10O43264 779 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 DNAJC6O75061 913 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 CES1P23141 567 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 MPSTP25325 297 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 FASLGP48023 281 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 NFATC3Q12968 1075 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 PEX6Q13608 980 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 KRT81Q14533 505 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 TMEM164Q5U3C3 297 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 TMEM71Q6P5X7 295 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 RAVER1Q8IY67 606 aaKnown RBP17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 NRSN1Q8IZ57 195 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 SFRP1Q8N474 314 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 LRRN4Q8WUT4 740 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 LYSMD1Q96S90 227 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 RIOK2Q9BVS4 552 aaKnown RBP17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 SLC12A9Q9BXP2 914 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 TDRD1Q9BXT4 1180 aaKnown RBP17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 AKAP7Q9P0M2 348 aaPredicted RBP17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 CHKBQ9Y259 395 aa17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 OAS3Q9Y6K5 1087 aaKnown RBP17.88■□□□□ 0.45
CHMP2A-208ENST00000601220 STMND1H3BQB6 276 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 MYO1FO00160 1098 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 MAP3K6O95382 1288 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 WISP1O95388 367 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 CLDN7O95471 211 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 SERPINC1P01008 464 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 SERPING1P05155 500 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 PYGLP06737 847 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 FAM87AP0C7U9 286 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 CCNCP24863 283 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 ITKQ08881 620 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 TDRD12Q587J7 1177 aaKnown RBP17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 ANKRD20A8PQ5CZ79 823 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 MARK2Q7KZI7 788 aaKnown RBP17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 NDUFAF2Q8N183 169 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 PQLC3Q8N755 202 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 AGBL5Q8NDL9 886 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 EXD1Q8NHP7 514 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 SLC37A2Q8TED4 501 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 JPH3Q8WXH2 748 aaPredicted RBP17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 FAF2Q96CS3 445 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 DPYSL5Q9BPU6 564 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 SPRY4Q9C004 299 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 RBM22Q9NW64 420 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 OCIAD1Q9NX40 245 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 KCNK4Q9NYG8 393 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 B3GALT1Q9Y5Z6 326 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 MYO18BQ8IUG5 2567 aa17.87■□□□□ 0.45
CHMP2A-208ENST00000601220 TRBV23OR9-2A0A075B6M9 112 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 B4E171 279 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 HLA-DQB2P05538 268 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 TSPAN7P41732 249 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 GPLD1P80108 840 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 ZBED6P86452 979 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 SLC10A2Q12908 348 aaPredicted RBP17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 LRP8Q14114 963 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 CLCA4Q14CN2 919 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 IFI16Q16666 785 aaKnown RBP17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 CCDC122Q5T0U0 273 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 ALKBH5Q6P6C2 394 aaKnown RBP17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 ZNF761Q86XN6 746 aaPredicted RBP17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 BMPERQ8N8U9 685 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 ART4Q93070 314 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 DDA1Q9BW61 102 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 CLMPQ9H6B4 373 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 CAPN11Q9UMQ6 739 aa17.86■□□□□ 0.45
CHMP2A-208ENST00000601220 A6NCN8 305 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 INPP4BO15327 924 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 MMP2P08253 660 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 UGT1A3P35503 534 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 TAS2R40P59535 323 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 RPL26P61254 145 aaKnown RBP17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 FANCCQ00597 558 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 KCNC4Q03721 635 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 GBE1Q04446 702 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 HADHQ16836 314 aaKnown RBP17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 TIGD7Q6NT04 549 aaPredicted RBP17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 CAVIN1Q6NZI2 390 aaKnown RBP17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 GALNT13Q8IUC8 556 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 ZSCAN1Q8NBB4 408 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 ARHGAP9Q9BRR9 750 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 ZNF670Q9BS34 389 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 VPS18Q9P253 973 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 RPL26L1Q9UNX3 145 aaKnown RBP17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 PRKAB1Q9Y478 270 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 BOD1L1Q8NFC6 3051 aa17.85■□□□□ 0.45
CHMP2A-208ENST00000601220 FADS2P1A8MWK0 482 aa17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 TERTO14746 1132 aaKnown RBP17.84■□□□□ 0.45
CHMP2A-208ENST00000601220 SUV39H1O43463 412 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms