RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 PADI4Q9UM07 663 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 GPR34Q9UPC5 381 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 SHOC2Q9UQ13 582 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 TMEM98Q9Y2Y6 226 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 ZNF711Q9Y462 761 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 SPO11Q9Y5K1 396 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 MAP1BP46821 2468 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 SPEGQ15772 3267 aa13.4□□□□□ -0.26
ARHGEF1-222ENST00000600517 TRABD2BA6NFA1 517 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 ANXA9O76027 345 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 IVLP07476 585 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 CLDN6P56747 220 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 DCDC1P59894 354 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 TARDBPQ13148 414 aaKnown RBP eCLIP13.39□□□□□ -0.276e-8■■■■■ 52.5
ARHGEF1-222ENST00000600517 TCEA2Q15560 299 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 SIRPB2Q5JXA9 342 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 CDCP2Q5VXM1 449 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 GUSBP11Q6P575 273 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 EFL1Q7Z2Z2 1120 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 TAF8Q7Z7C8 310 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 NRROSQ86YC3 692 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 ARL10Q8N8L6 244 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 DCBLD1Q8N8Z6 715 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 GPR26Q8NDV2 337 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 GPR156Q8NFN8 814 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 CCL4L1Q8NHW4 92 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 NAT6Q93015 286 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 GORASP1Q9BQQ3 440 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 TRABDQ9H4I3 376 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 GULP1Q9UBP9 304 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 SUFUQ9UMX1 484 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 TDRD6O60522 2096 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-222ENST00000600517 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 C5orf60A6NFR6 353 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 FADS2P1A8MWK0 482 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 F5H423 210 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 AURKAO14965 403 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 INPP4BO15327 924 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 NRDCO43847 1150 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 MT-CO3P00414 261 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 AGTP01019 485 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 HLA-DPA1P20036 260 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 HMGCLP35914 325 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 ADCY8P40145 1251 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 CHRNA4P43681 627 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 GNPDA1P46926 289 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 GEMP55040 296 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 ILF3Q12906 894 aaKnown RBP eCLIP13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 SLC1A5Q15758 541 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 PYCR3Q53H96 274 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 MEI1Q5TIA1 1274 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 DOK6Q6PKX4 331 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 RANBP10Q6VN20 620 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 TTC30BQ8N4P2 665 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 SLC25A41Q8N5S1 370 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 IPMKQ8NFU5 416 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 MAPK15Q8TD08 544 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 ABCG4Q9H172 646 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 LZTFL1Q9NQ48 299 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 HACD3Q9P035 362 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 VPS18Q9P253 973 aa13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 R3HDM2Q9Y2K5 976 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 AAR2Q9Y312 384 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-222ENST00000600517 KMT2BQ9UMN6 2715 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 ATP1A1P05023 1023 aaKnown RBP13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 FGF1P05230 155 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 BPIP17213 487 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 ADRA1AP35348 466 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 CTBSQ01459 385 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 PRPSAP1Q14558 356 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 RPS6KA1Q15418 735 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 ST3GAL2Q16842 350 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 PERM1Q5SV97 790 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 PDPK2PQ6A1A2 396 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 TRIM74Q86UV6 250 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 KLHDC8BQ8IXV7 354 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 TRAM1L1Q8N609 369 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 KYQ8NBH2 561 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 OR6C4Q8NGE1 309 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 CCDC110Q8TBZ0 833 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 DTX3LQ8TDB6 740 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 PPP1R2P1Q96PQ5 205 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 ZSCAN5AQ9BUG6 496 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 SPATA16Q9BXB7 569 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 GSDMCQ9BYG8 508 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 SPATS2LQ9NUQ6 558 aaKnown RBP13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 SIRPGQ9P1W8 387 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 PPP2R2CQ9Y2T4 447 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 ST14Q9Y5Y6 855 aa13.37□□□□□ -0.27
ARHGEF1-222ENST00000600517 GOLGA4Q13439 2230 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms