RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TMEM145Q8NBT3 493 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 DENND6BQ8NEG7 585 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 SEC14L1Q92503 715 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 SERPINB12Q96P63 405 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 RANBP9Q96S59 729 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 XAB2Q9HCS7 855 aaKnown RBP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 MBNL1Q9NR56 388 aaKnown RBP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 TMEM74BQ9NUR3 256 aa18.79■□□□□ 0.6
CCDC9-205ENST00000600117 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 DMGDHQ9UI17 866 aaKnown RBP18.79■□□□□ 0.6
CCDC9-205ENST00000600117 ATXN2Q99700 1313 aaKnown RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 RGSL1A5PLK6 1076 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 PRAMEF26H0Y7S4 382 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 SMAPO00193 183 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 AP3B1O00203 1094 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 BUD23O43709 281 aaKnown RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 AVILO75366 819 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 LPOP22079 712 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 MGAT1P26572 445 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 IGFALSP35858 605 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 NPY2RP49146 381 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 ZNF140P52738 457 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 DRG2P55039 364 aaKnown RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 SESN2P58004 480 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 SARNPP82979 210 aaKnown RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 MTM1Q13496 603 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 PTPRCAPQ14761 206 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 IRF4Q15306 451 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 ZNF423Q2M1K9 1284 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 C19orf48Q6RUI8 117 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 ZNF765Q7L2R6 523 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 RAB44Q7Z6P3 723 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 NRSN1Q8IZ57 195 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 RGL4Q8IZJ4 473 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 PELI3Q8N2H9 469 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 GPR26Q8NDV2 337 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 NUS1Q96E22 293 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 SERAC1Q96JX3 654 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 SLC6A18Q96N87 628 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 MYOCQ99972 504 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 C1QTNF7Q9BXJ2 289 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 ABCG8Q9H221 673 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 KCTD5Q9NXV2 234 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 PKD2L2Q9NZM6 624 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 NFKBIL1Q9UBC1 381 aaPredicted RBP18.78■□□□□ 0.6
CCDC9-205ENST00000600117 ANAPC5Q9UJX4 755 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 PILRBQ9UKJ0 227 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 CA5BQ9Y2D0 317 aa18.78■□□□□ 0.6
CCDC9-205ENST00000600117 MROH6A6NGR9 719 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 CRTAMO95727 393 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 BPIP17213 487 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 PSMA3P25788 255 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 AKT2P31751 481 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 HOXD12P35452 270 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 SEPT6Q14141 434 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 LRRC14Q15048 493 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 CCDC38Q502W7 563 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 ZDHHC24Q6UX98 284 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 KDM7AQ6ZMT4 941 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 GCNT7Q6ZNI0 430 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 NLRP8Q86W28 1048 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 AGGF1Q8N302 714 aaeCLIP18.77■□□□□ 0.6
CCDC9-205ENST00000600117 MPP5Q8N3R9 675 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 BBOF1Q8ND07 529 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 SCAMP4Q969E2 229 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 IL22Q9GZX6 179 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 MIR1-1HGQ9H1L0 117 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 TM9SF3Q9HD45 589 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 BPIFA1Q9NP55 256 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 BFARQ9NZS9 450 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 CD84Q9UIB8 345 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 HS3ST3A1Q9Y663 406 aa18.77■□□□□ 0.6
CCDC9-205ENST00000600117 ZNF106Q9H2Y7 1883 aaKnown RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 A0A1W2PR77 199 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 ESYT3A0FGR9 886 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 C2orf81A6NN90 581 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 NDC80O14777 642 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 ADRA1DP25100 572 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 ATXN3P54252 364 aaPredicted RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 CLDN2P57739 230 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 DCDC1P59894 354 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 RACK1P63244 317 aaKnown RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 CRADDP78560 199 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 GUCY2DQ02846 1103 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 DPTQ07507 201 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 CALCOCO2Q13137 446 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 PCID2Q5JVF3 399 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 FNBP1LQ5T0N5 605 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 HENMT1Q5T8I9 393 aaKnown RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 ESRP1Q6NXG1 681 aaKnown RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 ZCCHC9Q8N567 271 aaKnown RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 PLA2G15Q8NCC3 412 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 OR4K2Q8NGD2 314 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 OR13C4Q8NGS5 318 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 BMFQ96LC9 184 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 PWWP2AQ96N64 755 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 C19orf43Q9BQ61 176 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 FRMD8Q9BZ67 464 aaPredicted RBP18.76■□□□□ 0.59
CCDC9-205ENST00000600117 SYBUQ9NX95 663 aa18.76■□□□□ 0.59
CCDC9-205ENST00000600117 TCAF1Q9Y4C2 921 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms