RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 PLA2G15Q8NCC3 412 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 OR4K2Q8NGD2 314 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 BTN2A2Q8WVV5 523 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 FUBP1Q96AE4 644 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 HIC2Q96JB3 615 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 WDR92Q96MX6 357 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SERPINB12Q96P63 405 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 NAT9Q9BTE0 207 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SPATA16Q9BXB7 569 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 PARD6AQ9NPB6 346 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 DNAAF2Q9NVR5 837 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SMOXQ9NWM0 555 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 VPS18Q9P253 973 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 CA5BQ9Y2D0 317 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 TCAF1Q9Y4C2 921 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 PCDHGB2Q9Y5G2 931 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SNX11Q9Y5W9 270 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 GVINP1Q7Z2Y8 2422 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 GON4LQ3T8J9 2241 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SDK1Q7Z5N4 2213 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 CACNA1EQ15878 2313 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 A0A0U1RQS6 177 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 RAD51CO43502 376 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 TMEM63AO94886 807 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SOD1P00441 154 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SLC4A1P02730 911 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 TUBB4BP68371 445 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 CDK3Q00526 305 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 BNC1Q01954 994 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 ACVR1Q04771 509 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 HLA-BQ31612 363 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 AASDHQ4L235 1098 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 CERCAMQ5T4B2 595 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 ANKRD22Q5VYY1 191 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 DUPD1Q68J44 220 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 HIBCHQ6NVY1 386 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 ZNF534Q76KX8 674 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 HEATR4Q86WZ0 1026 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SPATS2Q86XZ4 545 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 CCNJLQ8IV13 435 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 PDIK1LQ8N165 341 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SLC22A18ASQ8N1D0 253 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SDR16C5Q8N3Y7 309 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 DCLK2Q8N568 766 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 LRRC39Q96DD0 335 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 COX14Q96I36 57 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 KIFC1Q9BW19 673 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 FAM129AQ9BZQ8 928 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 TMEM9BQ9NQ34 198 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 SAMD15Q9P1V8 674 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 CD84Q9UIB8 345 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 OR1A2Q9Y585 309 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 DGKBQ9Y6T7 804 aa16.46■□□□□ 0.23
SHKBP1-219ENST00000599575 A0A1B0GTQ1 180 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 TCRBV7S3A2A0A539 114 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 AGAP14A8MT82 685 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 H3BM21 787 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 K7ESM1 405 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 PCDHGA12O60330 932 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 CSF2P04141 144 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 NME1P15531 152 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 SDHBP21912 280 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 SESN2P58004 480 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 SEPT6Q14141 434 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 FZD2Q14332 565 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 SUZ12Q15022 739 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 SF3A2Q15428 464 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 CCDC6Q16204 474 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 TSTD2Q5T7W7 516 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 RFLNAQ6ZTI6 216 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 PHYKPLQ8IUZ5 450 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 OR56A4Q8NGH8 313 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 HEXDCQ8WVB3 486 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 GLYATL1Q969I3 302 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 ULK4Q96C45 1275 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 EDEM2Q9BV94 578 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 ZCCHC2Q9C0B9 1178 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 PHACTR1Q9C0D0 580 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 GAREM1Q9H706 876 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 RMI1Q9H9A7 625 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 BPIFA1Q9NP55 256 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 ANAPC5Q9UJX4 755 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 SLC17A4Q9Y2C5 497 aa16.45■□□□□ 0.22
SHKBP1-219ENST00000599575 VEGFDO43915 354 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 SRP72O76094 671 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 RASGRP1O95267 797 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 PRAMEF1O95521 474 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 ITGALP20701 1170 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 CCT8P50990 548 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 PPARDQ03181 441 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 NFATC2Q13469 925 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 LDLRAP1Q5SW96 308 aa16.44■□□□□ 0.22
SHKBP1-219ENST00000599575 TCEAL6Q6IPX3 200 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms