RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 MAK16Q9BXY0 300 aaKnown RBP9.75□□□□□ -0.85
VRK3-216ENST00000599342 PACSIN1Q9BY11 444 aa9.75□□□□□ -0.85
VRK3-216ENST00000599342 SEMA6CQ9H3T2 930 aa9.75□□□□□ -0.85
VRK3-216ENST00000599342 PKD2L2Q9NZM6 624 aa9.75□□□□□ -0.85
VRK3-216ENST00000599342 NENFQ9UMX5 172 aa9.75□□□□□ -0.85
VRK3-216ENST00000599342 RPL26L1Q9UNX3 145 aaKnown RBP9.75□□□□□ -0.85
VRK3-216ENST00000599342 TMEM98Q9Y2Y6 226 aa9.75□□□□□ -0.85
VRK3-216ENST00000599342 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
VRK3-216ENST00000599342 SSU72P8A0A1W2PR75 194 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 HGSO14964 777 aaPredicted RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 B4GAT1O43505 415 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 CLDN7O95471 211 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 TMEM253P0C7T8 217 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 KDELR1P24390 212 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 CD82P27701 267 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 CD86P42081 329 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 LRP8Q14114 963 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 PYCR3Q53H96 274 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 MANEAQ5SRI9 462 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 KIAA1614Q5VZ46 1190 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 USP53Q70EK8 1073 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 TMPRSS9Q7Z410 1059 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 PQLC3Q8N755 202 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 CCDC112Q8NEF3 446 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 OR8K1Q8NGG5 319 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 ARRDC2Q8TBH0 407 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 LRRN4Q8WUT4 740 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 PATE1Q8WXA2 126 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 TTC9Q92623 222 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 USP7Q93009 1102 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 SCARF2Q96GP6 870 aaPredicted RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 AHCYL2Q96HN2 611 aaKnown RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 SMIM14Q96QK8 99 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 LYSMD1Q96S90 227 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 NUDT22Q9BRQ3 303 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 MLPHQ9BV36 600 aaPredicted RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 RIOK2Q9BVS4 552 aaKnown RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 ADGRE3Q9BY15 652 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 STN1Q9H668 368 aaKnown RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 KCNK4Q9NYG8 393 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 DTLQ9NZJ0 730 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 VPS18Q9P253 973 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 ZNHIT2Q9UHR6 403 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 HEY1Q9Y5J3 304 aa9.74□□□□□ -0.85
VRK3-216ENST00000599342 SMG1Q96Q15 3661 aaKnown RBP9.74□□□□□ -0.85
VRK3-216ENST00000599342 BPTFQ12830 3046 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 ATRXP46100 2492 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 ZNF487B1APH4 448 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 KCNK1O00180 336 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 APOL1O14791 398 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
VRK3-216ENST00000599342 PRLP01236 227 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 JCHAINP01591 159 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 CD1CP29017 333 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 ETV5P41161 510 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 SPINT3P49223 89 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 GPLD1P80108 840 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 PPIDQ08752 370 aaKnown RBP9.73□□□□□ -0.85
VRK3-216ENST00000599342 NIPAL4Q0D2K0 466 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 AP1B1Q10567 949 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 SLC10A2Q12908 348 aaPredicted RBP9.73□□□□□ -0.85
VRK3-216ENST00000599342 TRA2AQ13595 282 aaKnown RBP eCLIP9.73□□□□□ -0.85
VRK3-216ENST00000599342 LY6DQ14210 128 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 C16orf72Q14CZ0 275 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 PDK1Q15118 436 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 TGIF1Q15583 401 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 RHOT2Q8IXI1 618 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 ZSCAN1Q8NBB4 408 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 RCBTB1Q8NDN9 531 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 OR4D9Q8NGE8 314 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 SLC35G2Q8TBE7 412 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 RAPGEF5Q92565 580 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 COX14Q96I36 57 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 CCDC74BQ96LY2 380 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 CCDC42Q96M95 316 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 RNF157Q96PX1 679 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 AGAP2Q99490 1192 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 DNAJC7Q99615 494 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 SLC38A3Q99624 504 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 DPYSL5Q9BPU6 564 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 ABHD10Q9NUJ1 306 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 FOXJ2Q9P0K8 574 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 PLEKHM1Q9Y4G2 1056 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 ST14Q9Y5Y6 855 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 PTPRQQ9UMZ3 2332 aa9.73□□□□□ -0.85
VRK3-216ENST00000599342 IGHV1OR21-1A0A087WYE8 117 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 IGHV5-10-1A0A0J9YXX1 117 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 RGSL1A5PLK6 1076 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 ANKRD66B4E2M5 251 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 C9orf172C9J069 976 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 STMND1H3BQB6 276 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 PPM1DO15297 605 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 DUX1O43812 170 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 SLC4A1P02730 911 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 KRT1P04264 644 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 ATP1A1P05023 1023 aaKnown RBP9.72□□□□□ -0.85
VRK3-216ENST00000599342 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 SLC2A4P14672 509 aa9.72□□□□□ -0.85
VRK3-216ENST00000599342 ZFXP17010 805 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms