RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CLCA4Q14CN2 919 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 TBR1Q16650 682 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 PYCR3Q53H96 274 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ART4Q93070 314 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 SCARF2Q96GP6 870 aaPredicted RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 FUCA2Q9BTY2 467 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 RIOK2Q9BVS4 552 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 TDRD1Q9BXT4 1180 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZMYND15Q9H091 742 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 KCNK4Q9NYG8 393 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 IP6K2Q9UHH9 426 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 B3GALT1Q9Y5Z6 326 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 SNRNP200O75643 2136 aaKnown RBP12.02□□□□□ -0.48
SOX2-OT-228ENST00000597828 FADS2P1A8MWK0 482 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 CLDN7O95471 211 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 ASMTLO95671 621 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 SERPINC1P01008 464 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 PRLP01236 227 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 CYP1A2P05177 515 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 NFKBIAP25963 317 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 GPR3P46089 330 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 STC1P52823 247 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 TAS2R40P59535 323 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 NIPAL4Q0D2K0 466 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 RALGPS1Q5JS13 557 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 ALG1LQ6GMV1 187 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 FAM129CQ86XR2 697 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 LPCAT1Q8NF37 534 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 FAM71BQ8TC56 605 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 MAML1Q92585 1016 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 NKD1Q969G9 470 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 RNF31Q96EP0 1072 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 COX14Q96I36 57 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 WDR24Q96S15 920 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 FAM117AQ9C073 453 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 POLR1EQ9GZS1 481 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 CLMPQ9H6B4 373 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 KCTD5Q9NXV2 234 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 SPTBP11277 2137 aa12.02□□□□□ -0.49
SOX2-OT-228ENST00000597828 EFCAB7A8K855 629 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 A8MU76 341 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 STMND1H3BQB6 276 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 DNAJC6O75061 913 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 ITGB2P05107 769 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 LIFP15018 202 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZNF30P17039 623 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 CD82P27701 267 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 UGT1A3P35503 534 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 PBX1P40424 430 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 PPM1FP49593 454 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 EPHB1P54762 984 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 GBE1Q04446 702 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 PAFAH1B3Q15102 231 aaKnown RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 FIGNQ5HY92 759 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 SNAP47Q5SQN1 464 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 ANKS6Q68DC2 871 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 GALNT13Q8IUC8 556 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 OR4D9Q8NGE8 314 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 ARRDC2Q8TBH0 407 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZNF564Q8TBZ8 553 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 CPLX3Q8WVH0 158 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 TAAR9Q96RI9 348 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 SLC12A9Q9BXP2 914 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 BRD8Q9H0E9 1235 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 ARFGAP3Q9NP61 516 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 STARD5Q9NSY2 213 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 RBM22Q9NW64 420 aaKnown RBP eCLIP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 AKAP7Q9P0M2 348 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 CNOT6Q9ULM6 557 aaKnown RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 KCNK6Q9Y257 313 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 HEMK1Q9Y5R4 338 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 MED13Q9UHV7 2174 aa12.01□□□□□ -0.49
SOX2-OT-228ENST00000597828 FER1L5A0AVI2 2057 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 C1orf232A0A0U1RR37 186 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 SYCE3A1L190 88 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 WISP1O95388 367 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 SERPING1P05155 500 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 MMP2P08253 660 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ACP5P13686 325 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 CSTF2P33240 577 aaKnown RBP eCLIP12□□□□□ -0.49
SOX2-OT-228ENST00000597828 MAPK9P45984 424 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 FASLGP48023 281 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 FANCCQ00597 558 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 SLC10A2Q12908 348 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-228ENST00000597828 NFATC2Q13469 925 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 TRA2AQ13595 282 aaKnown RBP eCLIP12□□□□□ -0.49
SOX2-OT-228ENST00000597828 GALNT3Q14435 633 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 CCDC122Q5T0U0 273 aa12□□□□□ -0.49
SOX2-OT-228ENST00000597828 CHCHD2P9Q5T1J5 151 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZNF648Q5T619 568 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-228ENST00000597828 ZNF765Q7L2R6 523 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms