RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PDIA2Q13087 525 aaKnown RBP14.96□□□□□ -0.01
TRIM28-207ENST00000597136 BRD3Q15059 726 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 IRF4Q15306 451 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 TPRG1LQ5T0D9 272 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 CEP128Q6ZU80 1094 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 LYSMD3Q7Z3D4 306 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 NDUFAF2Q8N183 169 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 MFSD2AQ8NA29 543 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 OR13H1Q8NG92 308 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 KLHDC7BQ96G42 594 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 LYSMD1Q96S90 227 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.01
TRIM28-207ENST00000597136 IL21RQ9HBE5 538 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 SAYSD1Q9NPB0 183 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 CD84Q9UIB8 345 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 HS3ST3A1Q9Y663 406 aa14.96□□□□□ -0.01
TRIM28-207ENST00000597136 RP1P56715 2156 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 CCDC151A5D8V7 595 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 K7ESM1 405 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 TLR4O00206 839 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 ARHGEF7Q14155 803 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 FASTKD3Q14CZ7 662 aaKnown RBP14.95□□□□□ -0.02
TRIM28-207ENST00000597136 LRRC14Q15048 493 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 AGERQ15109 404 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 HP1BP3Q5SSJ5 553 aaPredicted RBP14.95□□□□□ -0.02
TRIM28-207ENST00000597136 EMBQ6PCB8 327 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 Q6ZSR6 202 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 TECPR1Q7Z6L1 1165 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 RABEPKQ7Z6M1 372 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 ABI3BPQ7Z7G0 1075 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 RELL1Q8IUW5 271 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 IGDCC3Q8IVU1 814 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 MPP5Q8N3R9 675 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 LRRC39Q96DD0 335 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 WDR83Q9BRX9 315 aaKnown RBP14.95□□□□□ -0.02
TRIM28-207ENST00000597136 IL22Q9GZX6 179 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 SYBUQ9NX95 663 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 TEX264Q9Y6I9 313 aa14.95□□□□□ -0.02
TRIM28-207ENST00000597136 C1orf232A0A0U1RR37 186 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 FPGTO14772 594 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 THEGLP0DJG4 465 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 HOXD11P31277 338 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-207ENST00000597136 ELK3P41970 407 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 CTSKP43235 329 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 MAGEA4P43358 317 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 STC1P52823 247 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 INPP5AQ14642 412 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 POU6F1Q14863 301 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 SLMAPQ14BN4 828 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 TEAD4Q15561 434 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 MAP9Q49MG5 647 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 AASDHQ4L235 1098 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-207ENST00000597136 TMC3Q7Z5M5 1100 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 ZBED8Q8IZ13 594 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 SLC22A18ASQ8N1D0 253 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 SCAMP4Q969E2 229 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 TXLNGYQ9BZA5 131 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 MAGEE1Q9HCI5 957 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-207ENST00000597136 BUD23O43709 281 aaKnown RBP14.94□□□□□ -0.02
TRIM28-207ENST00000597136 ERLIN1O75477 346 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 PCCBP05166 539 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 NFKBIAP25963 317 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 C21orf59P57076 290 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 HLA-BQ31612 363 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 CCDC38Q502W7 563 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 CASC4Q6P4E1 433 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 PTAR1Q7Z6K3 402 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-207ENST00000597136 ANKMY2Q8IV38 441 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 FBXO36Q8NEA4 188 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 BRSK1Q8TDC3 778 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 BLOC1S5Q8TDH9 187 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 CAVIN3Q969G5 261 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 DTD2Q96FN9 168 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 EBNA1BP2Q99848 306 aaKnown RBP14.94□□□□□ -0.02
TRIM28-207ENST00000597136 EDEM2Q9BV94 578 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 ABCG8Q9H221 673 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 MAD1L1Q9Y6D9 718 aa14.94□□□□□ -0.02
TRIM28-207ENST00000597136 SPEGQ15772 3267 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 MAGEB16A2A368 324 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 A6NNZ2 444 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 C4orf47A7E2U8 309 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 PSMD11O00231 422 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 SLC4A1P02730 911 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 SYPP08247 313 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 H2AFXP16104 143 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-207ENST00000597136 ADRA1DP25100 572 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 NXPH1P58417 271 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 PFN3P60673 137 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 PTPRCAPQ14761 206 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 ZNF542PQ5EBM4 170 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 PCID2Q5JVF3 399 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 ARMC3Q5W041 872 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 IQCHQ86VS3 1027 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 TTC30BQ8N4P2 665 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 MINDY1Q8N5J2 469 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 DENND6BQ8NEG7 585 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 PYROXD1Q8WU10 500 aa14.93□□□□□ -0.02
TRIM28-207ENST00000597136 HNRNPLLQ8WVV9 542 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms