RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 DPH1Q9BZG8 443 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 CDH19Q9H159 772 aa23.35■■□□□ 1.33
LSM4-204ENST00000594828 ATXN7L1Q9ULK2 861 aaPredicted RBP23.35■■□□□ 1.33
LSM4-204ENST00000594828 PLD2O14939 933 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 INPP4BO15327 924 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 ASMTLO95671 621 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 ECEL1O95672 775 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 CCKBRP32239 447 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 SPINT3P49223 89 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 MAZP56270 477 aaKnown RBP23.34■■□□□ 1.33
LSM4-204ENST00000594828 MARK2Q7KZI7 788 aaKnown RBP23.34■■□□□ 1.33
LSM4-204ENST00000594828 RAB11FIP2Q7L804 512 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 IMP4Q96G21 291 aaKnown RBP23.34■■□□□ 1.33
LSM4-204ENST00000594828 COX14Q96I36 57 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 FAM83DQ9H4H8 585 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 PKD2L2Q9NZM6 624 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 PLEKHM1Q9Y4G2 1056 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 ALG6Q9Y672 507 aa23.34■■□□□ 1.33
LSM4-204ENST00000594828 RGSL1A5PLK6 1076 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 RHPN2P1A8MT19 583 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 KLK10O43240 276 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 ITGA2BP08514 1039 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 ACTR1BP42025 376 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 NR2C2P49116 596 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 HADHBP55084 474 aaKnown RBP23.33■■□□□ 1.33
LSM4-204ENST00000594828 ACTR1AP61163 376 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 CXADRP78310 365 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 B4GALNT1Q00973 533 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 BIRC2Q13490 618 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 GALNT3Q14435 633 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 PYCR3Q53H96 274 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 B4GALNT4Q76KP1 1039 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 BZW1Q7L1Q6 419 aaKnown RBP23.33■■□□□ 1.33
LSM4-204ENST00000594828 GPR155Q7Z3F1 870 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 KDELC2Q7Z4H8 507 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 CCDC97Q96F63 343 aaPredicted RBP23.33■■□□□ 1.33
LSM4-204ENST00000594828 BBC3Q96PG8 261 aaPredicted RBP23.33■■□□□ 1.33
LSM4-204ENST00000594828 WDR24Q96S15 920 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 SLC25A51Q9H1U9 297 aa23.33■■□□□ 1.33
LSM4-204ENST00000594828 ZW10O43264 779 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 B4GAT1O43505 415 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 PSTPIP1O43586 416 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 ALDH4A1P30038 563 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 UGT1A5P35504 534 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 CDKN2BP42772 138 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 ZFP36L1Q07352 338 aaKnown RBP23.32■■□□□ 1.32
LSM4-204ENST00000594828 TFDP2Q14188 446 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 CLEC14AQ86T13 490 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 GALNT13Q8IUC8 556 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 NAGSQ8N159 534 aa23.32■■□□□ 1.32
LSM4-204ENST00000594828 UBL7Q96S82 380 aaPredicted RBP23.32■■□□□ 1.32
LSM4-204ENST00000594828 CNOT6Q9ULM6 557 aaKnown RBP23.32■■□□□ 1.32
LSM4-204ENST00000594828 LCA5LO95447 670 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 UCNP55089 124 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 OR1D5P58170 312 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 TAZQ16635 292 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 KIF26BQ2KJY2 2108 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 AMZ1Q400G9 498 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 TEX44Q53QW1 395 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 HENMT1Q5T8I9 393 aaKnown RBP23.31■■□□□ 1.32
LSM4-204ENST00000594828 LYSMD3Q7Z3D4 306 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 ZNF438Q7Z4V0 828 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 CCDC170Q8IYT3 715 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 PATE1Q8WXA2 126 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 TRIB3Q96RU7 358 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 ZFYVE1Q9HBF4 777 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 VPS18Q9P253 973 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 SAE1Q9UBE0 346 aaPredicted RBP23.31■■□□□ 1.32
LSM4-204ENST00000594828 ZNHIT2Q9UHR6 403 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 PCDHA13Q9Y5I0 950 aa23.31■■□□□ 1.32
LSM4-204ENST00000594828 ARHGEF17Q96PE2 2063 aaPredicted RBP23.31■■□□□ 1.32
LSM4-204ENST00000594828 EIF4E1BA6NMX2 242 aaKnown RBP23.3■■□□□ 1.32
LSM4-204ENST00000594828 CST8O60676 142 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 ATP1A1P05023 1023 aaKnown RBP23.3■■□□□ 1.32
LSM4-204ENST00000594828 HGFP14210 728 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 TMPRSS3P57727 454 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 CDK18Q07002 472 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 LRP8Q14114 963 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 NR1D2Q14995 579 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 LLGL1Q15334 1064 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 SPA17Q15506 151 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 PCSK7Q16549 785 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 KAZNQ674X7 775 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 SPOCD1Q6ZMY3 1216 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 PIM3Q86V86 326 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 TFB1MQ8WVM0 346 aaKnown RBP23.3■■□□□ 1.32
LSM4-204ENST00000594828 TMEM159Q96B96 161 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 TADA1Q96BN2 335 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 GOLPH3Q9H4A6 298 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 RDH14Q9HBH5 336 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 GLOD4Q9HC38 313 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 MAGEE1Q9HCI5 957 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 LOXL2Q9Y4K0 774 aa23.3■■□□□ 1.32
LSM4-204ENST00000594828 OAS3Q9Y6K5 1087 aaKnown RBP23.3■■□□□ 1.32
LSM4-204ENST00000594828 TEX51A0A1B0GUA7 166 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 FADS2P1A8MWK0 482 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 DNAJC6O75061 913 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 ZRANB2O95218 330 aaKnown RBP eCLIP23.29■■□□□ 1.323e-6■■■■■ 27.8
LSM4-204ENST00000594828 CPNE6O95741 557 aa23.29■■□□□ 1.32
LSM4-204ENST00000594828 JMJD7P0C870 316 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms