RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 TMPRSS9Q7Z410 1059 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 PQLC3Q8N755 202 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 OR4D9Q8NGE8 314 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 OR8K1Q8NGG5 319 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 SCAMP4Q969E2 229 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 RNF157Q96PX1 679 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 ADGRE3Q9BY15 652 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 XPO4Q9C0E2 1151 aaKnown RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 SUDS3Q9H7L9 328 aaPredicted RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 RMI1Q9H9A7 625 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 ZNHIT6Q9NWK9 470 aaKnown RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 DTLQ9NZJ0 730 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 CD84Q9UIB8 345 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 CHKBQ9Y259 395 aa13.2□□□□□ -0.3
APOC1-209ENST00000592885 GCN1Q92616 2671 aaKnown RBP13.2□□□□□ -0.3
APOC1-209ENST00000592885 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 MTA2O94776 668 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 PRLP01236 227 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 TPM1P09493 284 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 ITIH1P19827 911 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 ALDH4A1P30038 563 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 POLD2P49005 469 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 LIMK2P53671 638 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 OR1D5P58170 312 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 IHHQ14623 411 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 PTPRRQ15256 657 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 SLC14A2Q15849 920 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 ZFYVE27Q5T4F4 411 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 HENMT1Q5T8I9 393 aaKnown RBP13.19□□□□□ -0.3
APOC1-209ENST00000592885 ZNF605Q86T29 641 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 CCNYQ8ND76 341 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 CCHCR1Q8TD31 782 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
APOC1-209ENST00000592885 RIOK2Q9BVS4 552 aaKnown RBP13.19□□□□□ -0.3
APOC1-209ENST00000592885 PACSIN1Q9BY11 444 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 SEMA6CQ9H3T2 930 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 STN1Q9H668 368 aaKnown RBP13.19□□□□□ -0.3
APOC1-209ENST00000592885 PCDHB11Q9Y5F2 797 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 ST14Q9Y5Y6 855 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 COL6A6A6NMZ7 2263 aa13.19□□□□□ -0.3
APOC1-209ENST00000592885 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 IGHV1OR21-1A0A087WYE8 117 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 IGHV5-10-1A0A0J9YXX1 117 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 C1orf232A0A0U1RR37 186 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 ANKRD66B4E2M5 251 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 PPP1R12AO14974 1030 aaPredicted RBP13.18□□□□□ -0.3
APOC1-209ENST00000592885 MAP3K6O95382 1288 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 CLDN7O95471 211 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 SLC2A4P14672 509 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 ZFXP17010 805 aaPredicted RBP13.18□□□□□ -0.3
APOC1-209ENST00000592885 CD1CP29017 333 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 SPINT3P49223 89 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
APOC1-209ENST00000592885 C16orf72Q14CZ0 275 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 QPCTQ16769 361 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 AMZ1Q400G9 498 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 LRRC38Q5VT99 294 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 SLC9A4Q6AI14 798 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 RFLNAQ6ZTI6 216 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 DTX1Q86Y01 620 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 CPNE8Q86YQ8 564 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 PLD5Q8N7P1 536 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.18□□□□□ -0.3
APOC1-209ENST00000592885 MED8Q96G25 268 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 CCDC74BQ96LY2 380 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 NUDT22Q9BRQ3 303 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 HERPUD2Q9BSE4 406 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 MLPHQ9BV36 600 aaPredicted RBP13.18□□□□□ -0.3
APOC1-209ENST00000592885 BRD8Q9H0E9 1235 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 RDH14Q9HBH5 336 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
APOC1-209ENST00000592885 TMEM98Q9Y2Y6 226 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 PCDHGA3Q9Y5H0 932 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 KALRNO60229 2985 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 MGAQ8IWI9 3026 aa13.18□□□□□ -0.3
APOC1-209ENST00000592885 A0A0U1RQS6 177 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 GPR89AB7ZAQ6 455 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 C9orf172C9J069 976 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 APOL1O14791 398 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 PPM1DO15297 605 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 DUX1O43812 170 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 AKR1B10O60218 316 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 DNAJC6O75061 913 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 ASMTLO95671 621 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 ITGB2P05107 769 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 MMP2P08253 660 aa13.17□□□□□ -0.3
APOC1-209ENST00000592885 GPR89BP0CG08 455 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms