RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 PCGF5Q86SE9 256 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 PPIL6Q8IXY8 311 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 OR56A4Q8NGH8 313 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 OR13C4Q8NGS5 318 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 HIC2Q96JB3 615 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 LGR4Q9BXB1 951 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 CDV3Q9UKY7 258 aaKnown RBP20.65■□□□□ 0.9
DNMT1-227ENST00000592342 ADAMTS9Q9P2N4 1935 aa20.65■□□□□ 0.9
DNMT1-227ENST00000592342 FADS2P1A8MWK0 482 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 LDB2O43679 373 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 ASMTLO95671 621 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 SOD1P00441 154 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 ZNF883P0CG24 379 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 JUNDP17535 347 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 MAGEA6P43360 314 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 NPY2RP49146 381 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 BLKP51451 505 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 LIMK1P53667 647 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 HNRNPKP61978 463 aaKnown RBP eCLIP20.64■□□□□ 0.89
DNMT1-227ENST00000592342 EIF2B5Q13144 721 aaKnown RBP20.64■□□□□ 0.89
DNMT1-227ENST00000592342 CCDC38Q502W7 563 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 ANKRD22Q5VYY1 191 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 PDPK2PQ6A1A2 396 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 LRRC8BQ6P9F7 803 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 DOK6Q6PKX4 331 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 FAM151BQ6UXP7 276 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 RD3Q7Z3Z2 195 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 HID1Q8IV36 788 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 PPHLN1Q8NEY8 458 aaKnown RBP20.64■□□□□ 0.89
DNMT1-227ENST00000592342 BTN2A2Q8WVV5 523 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 TRIM51Q9BSJ1 452 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 IL26Q9NPH9 171 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 FKBPLQ9UIM3 349 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 APPL1Q9UKG1 709 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 MRFAP1Q9Y605 127 aa20.64■□□□□ 0.89
DNMT1-227ENST00000592342 FAM186AA6NE01 2351 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 CCDC78A2IDD5 438 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 TMEM202A6NGA9 273 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 GOLGA8MH3BSY2 632 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 DNALI1O14645 258 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 SDC3O75056 442 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 RASGRP1O95267 797 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 CSF2P04141 144 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 ADRA1DP25100 572 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 EPHA8P29322 1005 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 RXRGP48443 463 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 ZNF140P52738 457 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 SRP54P61011 504 aaKnown RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 SLC14A1Q13336 389 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 ITGA9Q13797 1035 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 IZUMO3Q5VZ72 239 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 ZNF572Q7Z3I7 529 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 PHACTR4Q8IZ21 702 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 MNS1Q8NEH6 495 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 GDAP1Q8TB36 358 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 STYXQ8WUJ0 223 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 TSACCQ96A04 125 aaPredicted RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 RANBP9Q96S59 729 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 SLC13A1Q9BZW2 595 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 TRIM31Q9BZY9 425 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 IL22Q9GZX6 179 aa20.63■□□□□ 0.89
DNMT1-227ENST00000592342 APOBEC3BQ9UH17 382 aaKnown RBP20.63■□□□□ 0.89
DNMT1-227ENST00000592342 RIF1Q5UIP0 2472 aaKnown RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 FAM187AA6NFU0 413 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 EFCAB8A8MWE9 144 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 TMEM63AO94886 807 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 SLC25A14O95258 325 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 TNFP01375 233 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 CTSEP14091 401 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 NME1P15531 152 aaKnown RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 SDHBP21912 280 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 BNIP3Q12983 259 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 CHRNA6Q15825 494 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 SKIDA1Q1XH10 827 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 PCID2Q5JVF3 399 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 TRIM74Q86UV6 250 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 PHYKPLQ8IUZ5 450 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 MCUQ8NE86 351 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 DNAJC1Q96KC8 554 aaKnown RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 C19orf43Q9BQ61 176 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 SUDS3Q9H7L9 328 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 XAB2Q9HCS7 855 aaKnown RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 NLE1Q9NVX2 485 aaPredicted RBP20.62■□□□□ 0.89
DNMT1-227ENST00000592342 CACNA1EQ15878 2313 aa20.62■□□□□ 0.89
DNMT1-227ENST00000592342 TNFRSF10CO14798 259 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 PCDHGA12O60330 932 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 PRAMEF1O95521 474 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 MGAT1P26572 445 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 HK3P52790 923 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 MRPS25P82663 173 aaKnown RBP20.61■□□□□ 0.89
DNMT1-227ENST00000592342 RSPO4Q2I0M5 234 aaPredicted RBP20.61■□□□□ 0.89
DNMT1-227ENST00000592342 ALG11Q2TAA5 492 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 INAVAQ3KP66 663 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 ATP13A5Q4VNC0 1218 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 RNASEH2BQ5TBB1 312 aaKnown RBP20.61■□□□□ 0.89
DNMT1-227ENST00000592342 ZNF534Q76KX8 674 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 NLRP9Q7RTR0 991 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 GATAD2AQ86YP4 633 aa20.61■□□□□ 0.89
DNMT1-227ENST00000592342 RBFAQ8N0V3 343 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms