RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 C5orf60A6NFR6 353 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 IFNB1P01574 187 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 MYF5P13349 255 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 STIP1P31948 543 aaKnown RBP10.02□□□□□ -0.81
BRCA1-227ENST00000591849 CHRNA4P43681 627 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 POLD2P49005 469 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 ACADVLP49748 655 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 ILKQ13418 452 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 SNX1Q13596 522 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 PEX6Q13608 980 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 SLC1A5Q15758 541 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 CDKN3Q16667 212 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 PARP6Q2NL67 630 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 SIRPB2Q5JXA9 342 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 ZNF569Q5MCW4 686 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 EFL1Q7Z2Z2 1120 aaKnown RBP10.02□□□□□ -0.81
BRCA1-227ENST00000591849 GLT6D1Q7Z4J2 308 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 TMC3Q7Z5M5 1100 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-227ENST00000591849 TRIM74Q86UV6 250 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 CCDC89Q8N998 374 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 FAM181AQ8N9Y4 354 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 GDAP1Q8TB36 358 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 C1orf54Q8WWF1 131 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 ATG4AQ8WYN0 398 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 PDXPQ96GD0 296 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 AGAP2Q99490 1192 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 APOL2Q9BQE5 337 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 TMEM121Q9BTD3 319 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 CLPBQ9H078 707 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 TMEM168Q9H0V1 697 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 CARD9Q9H257 536 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 DPEP2Q9H4A9 486 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 SYNDIG1Q9H7V2 258 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 BPIFA1Q9NP55 256 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 TRMT1Q9NXH9 659 aaKnown RBP10.02□□□□□ -0.81
BRCA1-227ENST00000591849 ZNHIT2Q9UHR6 403 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 KLK13Q9UKR3 277 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 PADI4Q9UM07 663 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 SUFUQ9UMX1 484 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 R3HDM2Q9Y2K5 976 aaKnown RBP10.02□□□□□ -0.81
BRCA1-227ENST00000591849 NEUROG3Q9Y4Z2 214 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 SPO11Q9Y5K1 396 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 DGKBQ9Y6T7 804 aa10.02□□□□□ -0.81
BRCA1-227ENST00000591849 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 C2orf81A6NN90 581 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 B4DGG1 531 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 E7EVH7 732 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 STX7O15400 261 aaKnown RBP10.01□□□□□ -0.81
BRCA1-227ENST00000591849 KIF5CO60282 957 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 SLC25A14O95258 325 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-227ENST00000591849 GAS8O95995 478 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 FGGP02679 453 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 CEACAM5P06731 702 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 IVLP07476 585 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-227ENST00000591849 CKMT1AP12532 417 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 ACP1P24666 158 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 KLF1Q13351 362 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-227ENST00000591849 P3H1Q32P28 736 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 ZDHHC20Q5W0Z9 365 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 GSTA5Q7RTV2 222 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 TMPRSS12Q86WS5 348 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 GALNT13Q8IUC8 556 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 TRAM1L1Q8N609 369 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 GPR26Q8NDV2 337 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 SLC35B2Q8TB61 432 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 IFI44Q8TCB0 444 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 MAPK15Q8TD08 544 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 NAT6Q93015 286 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 TTC25Q96NG3 672 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 OR2M4Q96R27 311 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 TBL1YQ9BQ87 522 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 ZSCAN5AQ9BUG6 496 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 FRMD8Q9BZ67 464 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-227ENST00000591849 TOR4AQ9NXH8 423 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 PNMA8BQ9ULN7 279 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-227ENST00000591849 SLC17A4Q9Y2C5 497 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 DOCK9Q9BZ29 2069 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 ZFYVE26Q68DK2 2539 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 ASPMQ8IZT6 3477 aa10.01□□□□□ -0.81
BRCA1-227ENST00000591849 ATRXP46100 2492 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 SPEGQ15772 3267 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 TMEM8BA6NDV4 472 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 BUD23O43709 281 aaKnown RBP10□□□□□ -0.81
BRCA1-227ENST00000591849 LIASO43766 372 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 CRTAMO95727 393 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 ATP1A1P05023 1023 aaKnown RBP10□□□□□ -0.81
BRCA1-227ENST00000591849 PROS1P07225 676 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 GIMD1P0DJR0 217 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 BPIP17213 487 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 CXCR5P32302 372 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 SPAM1P38567 509 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 PPM1FP49593 454 aaPredicted RBP10□□□□□ -0.81
BRCA1-227ENST00000591849 GTF2H3Q13889 308 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 SPARCL1Q14515 664 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 HENMT1Q5T8I9 393 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms