RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 RBL1P28749 1068 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 RBMS1P29558 406 aaKnown RBP17.94■□□□□ 0.46
VAT1-208ENST00000590924 MLLT3P42568 568 aaPredicted RBP17.94■□□□□ 0.46
VAT1-208ENST00000590924 SCNN1BP51168 640 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 TMPRSS3P57727 454 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 KIAA1024LP59773 190 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 POLR2LP62875 67 aaKnown RBP17.94■□□□□ 0.46
VAT1-208ENST00000590924 SKOR1P84550 965 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 WASHC5Q12768 1159 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 SIX1Q15475 284 aaPredicted RBP17.94■□□□□ 0.46
VAT1-208ENST00000590924 LIPIQ6XZB0 460 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 RD3Q7Z3Z2 195 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 CNTD1Q8N815 330 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 WDR36Q8NI36 951 aaKnown RBP17.94■□□□□ 0.46
VAT1-208ENST00000590924 COG1Q8WTW3 980 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 SPOCK2Q92563 424 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 PDXPQ96GD0 296 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 TEKT5Q96M29 485 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 RBM15Q96T37 977 aaKnown RBP eCLIP17.94■□□□□ 0.46
VAT1-208ENST00000590924 DPH1Q9BZG8 443 aa17.94■□□□□ 0.46
VAT1-208ENST00000590924 CCDC187A0A096LP49 1063 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 A0A1W2PQ67 120 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 CDRT15L2A8MXV6 281 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 TRAFD1O14545 582 aaPredicted RBP17.93■□□□□ 0.46
VAT1-208ENST00000590924 CASC3O15234 703 aaKnown RBP17.93■□□□□ 0.46
VAT1-208ENST00000590924 LIASO43766 372 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 RECQL5O94762 991 aaPredicted RBP17.93■□□□□ 0.46
VAT1-208ENST00000590924 STK10O94804 968 aaKnown RBP17.93■□□□□ 0.46
VAT1-208ENST00000590924 ELFN1P0C7U0 828 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 PTPN3P26045 913 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 ZBTB17Q13105 803 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 SLC14A2Q15849 920 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 DPPA4Q7L190 304 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 PLA2G15Q8NCC3 412 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 OR6C4Q8NGE1 309 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 LRRN4Q8WUT4 740 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 SEPT10Q9P0V9 454 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 SIRPGQ9P1W8 387 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 GULP1Q9UBP9 304 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 GPR34Q9UPC5 381 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 SSUH2Q9Y2M2 353 aa17.93■□□□□ 0.46
VAT1-208ENST00000590924 GCN1Q92616 2671 aaKnown RBP17.92■□□□□ 0.46
VAT1-208ENST00000590924 C5orf60A6NFR6 353 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 CACNB4O00305 520 aaPredicted RBP17.92■□□□□ 0.46
VAT1-208ENST00000590924 SOCS5O75159 536 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 C1QL1O75973 258 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 TNFP01375 233 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 PRB1P04280 392 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 HLA-DQB2P05538 268 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 HOXC4P09017 264 aaPredicted RBP17.92■□□□□ 0.46
VAT1-208ENST00000590924 GM2AP17900 193 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 KELP23276 732 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 ITKQ08881 620 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 OASLQ15646 514 aaKnown RBP17.92■□□□□ 0.46
VAT1-208ENST00000590924 KCTD16Q68DU8 428 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 SYT10Q6XYQ8 523 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 CLEC14AQ86T13 490 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 ARL14Q8N4G2 192 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 PAF1Q8N7H5 531 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 OR56A4Q8NGH8 313 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 FUBP1Q96AE4 644 aaKnown RBP17.92■□□□□ 0.46
VAT1-208ENST00000590924 CCDC74AQ96AQ1 378 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 LIN37Q96GY3 246 aaPredicted RBP17.92■□□□□ 0.46
VAT1-208ENST00000590924 MS4A14Q96JA4 679 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 NSMCE3Q96MG7 304 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 SEMA3CQ99985 751 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 SLC25A51Q9H1U9 297 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 SYNDIG1Q9H7V2 258 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 NOD2Q9HC29 1040 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 RABGEF1Q9UJ41 708 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 DNPEPQ9ULA0 475 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 KALRNO60229 2985 aa17.92■□□□□ 0.46
VAT1-208ENST00000590924 TMEM202A6NGA9 273 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 D6RAR5 112 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 TNFRSF10CO14798 259 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 FANCGO15287 622 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 KCNN4O15554 427 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 KLK10O43240 276 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 TRIM23P36406 574 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 MAXP61244 160 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 C19orf57Q0VDD7 668 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 TCEA2Q15560 299 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 CYP1B1Q16678 543 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 B4GALNT4Q76KP1 1039 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 PID1Q7Z2X4 250 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 CREG2Q8IUH2 290 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 GPR156Q8NFN8 814 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 ARRDC2Q8TBH0 407 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 SNRNP27Q8WVK2 155 aaKnown RBP17.91■□□□□ 0.46
VAT1-208ENST00000590924 C1orf54Q8WWF1 131 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 OR1E3Q8WZA6 343 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 RTP4Q96DX8 246 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 CCDC97Q96F63 343 aaPredicted RBP17.91■□□□□ 0.46
VAT1-208ENST00000590924 AGAP3Q96P47 875 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 FAM118BQ9BPY3 351 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 GLOD4Q9HC38 313 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 FGF22Q9HCT0 170 aa17.91■□□□□ 0.46
VAT1-208ENST00000590924 HELZ2Q9BYK8 2649 aaKnown RBP17.9■□□□□ 0.46
VAT1-208ENST00000590924 PMS2P1A4D2B8 440 aa17.9■□□□□ 0.46
VAT1-208ENST00000590924 ERVH48-1M5A8F1 160 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms