RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 UBP1Q9NZI7 540 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 APPL1Q9UKG1 709 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 PCDHGA8Q9Y5G5 932 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 SPO11Q9Y5K1 396 aa16.75■□□□□ 0.27
CROCCP3-203ENST00000589964 C1orf232A0A0U1RR37 186 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 A0A1W2PQ67 120 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 APOL1O14791 398 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 AURKAO14965 403 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 MT-CYBP00156 380 aaPredicted RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 TPM3P06753 285 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 GLB1P16278 677 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 KELP23276 732 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 CD68P34810 354 aaPredicted RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 CA5AP35218 305 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 CDKN2BP42772 138 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 INHBCP55103 352 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 ERVPABLB-1P60509 514 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 ZFP36L1Q07352 338 aaKnown RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 AP1B1Q10567 949 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 CLN3Q13286 438 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 PCSK7Q16549 785 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 TAZQ16635 292 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 KHDC1Q4VXA5 237 aaKnown RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 PYCR3Q53H96 274 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 ALS2CLQ60I27 953 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 IGF2-ASQ6U949 168 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF438Q7Z4V0 828 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 CLEC14AQ86T13 490 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF248Q8NDW4 579 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 WDR36Q8NI36 951 aaKnown RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 KCNE4Q8WWG9 221 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 KRT35Q92764 455 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 LIN37Q96GY3 246 aaPredicted RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 OR2M4Q96R27 311 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNHIT6Q9NWK9 470 aaKnown RBP16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 FOXJ2Q9P0K8 574 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 PISDQ9UG56 409 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 SHOC2Q9UQ13 582 aa16.74■□□□□ 0.27
CROCCP3-203ENST00000589964 AKR1B15C9JRZ8 316 aaPredicted RBP16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 PLD2O14939 933 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 DNAJC6O75061 913 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 MPSTP25325 297 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 TEAD1P28347 426 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 ACTR1BP42025 376 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 SPINT3P49223 89 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 ACTR1AP61163 376 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 WASHC5Q12768 1159 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 HENMT1Q5T8I9 393 aaKnown RBP16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 ARHGAP40Q5TG30 622 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 RAB11FIP2Q7L804 512 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 MAP7D3Q8IWC1 876 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 RCBTB1Q8NDN9 531 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 GPR26Q8NDV2 337 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 IMP4Q96G21 291 aaKnown RBP16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 LYSMD1Q96S90 227 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 THSD1Q9NS62 852 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 TRNAU1APQ9NX07 287 aaKnown RBP16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 TMPRSS11EQ9UL52 423 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 SSUH2Q9Y2M2 353 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 LOXL2Q9Y4K0 774 aa16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 GCN1Q92616 2671 aaKnown RBP16.73■□□□□ 0.27
CROCCP3-203ENST00000589964 A0A0U1RQJ8 604 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 GPR39O43194 453 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 CCL4P13236 92 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 WT1P19544 449 aaPredicted RBP16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 MX2P20592 715 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 PTMSP20962 102 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 PTPN3P26045 913 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 CD1CP29017 333 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 RBMS1P29558 406 aaKnown RBP16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 ALDH4A1P30038 563 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 SLC5A2P31639 672 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 CHRNA4P43681 627 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 ARSDP51689 593 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 ILF3Q12906 894 aaKnown RBP eCLIP16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 PRKD1Q15139 912 aaPredicted RBP16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 KAZNQ674X7 775 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF765Q7L2R6 523 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 SLC37A2Q8TED4 501 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 GSDMCQ9BYG8 508 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 SEMA4CQ9C0C4 833 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 KCNK6Q9Y257 313 aa16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
CROCCP3-203ENST00000589964 ZFC3H1O60293 1989 aaKnown RBP16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 PRAMEF33A0A0G2JMD5 474 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF487B1APH4 448 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 ANKRD66B4E2M5 251 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 NUDT21O43809 227 aaKnown RBP16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 PRAMEF10O60809 474 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 ZNF30P17039 623 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 CCKBRP32239 447 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 ARHGAP25P42331 645 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 TCEAL1Q15170 157 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 PHF19Q5T6S3 580 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 LRRC38Q5VT99 294 aa16.71■□□□□ 0.27
CROCCP3-203ENST00000589964 KIAA1614Q5VZ46 1190 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms