RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MCCC1Q96RQ3 725 aaPredicted RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 RBM15Q96T37 977 aaKnown RBP eCLIP10.36□□□□□ -0.75
SDF2-208ENST00000589788 VAT1Q99536 393 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 APOOQ9BUR5 198 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 SLC13A1Q9BZW2 595 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 SLC25A51Q9H1U9 297 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 GLOD4Q9HC38 313 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 GOLGA6AQ9NYA3 693 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 KLHL8Q9P2G9 620 aaPredicted RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 PPIL1Q9Y3C6 166 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 OR1A2Q9Y585 309 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 CAPN6Q9Y6Q1 641 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 CAPN8A6NHC0 703 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 CACNB4O00305 520 aaPredicted RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 ENC1O14682 589 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PMPCBO75439 489 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 STK10O94804 968 aaKnown RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 TRIM16O95361 564 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PRLP01236 227 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 TUBB4AP04350 444 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 PCSK2P16519 638 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PMLP29590 882 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 ETV3P41162 512 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 BLKP51451 505 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 EIF3EP60228 445 aaKnown RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 PPARDQ03181 441 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PTSQ03393 145 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 WASHC5Q12768 1159 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 EIF2B5Q13144 721 aaKnown RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 NFATC4Q14934 902 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PTPRRQ15256 657 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 CCDC157Q569K6 752 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PRRT3Q5FWE3 981 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 FAM182AQ5T1J6 154 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 LRRC66Q68CR7 880 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PNCKQ6P2M8 343 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 CRTC1Q6UUV9 634 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 ENPP7Q6UWV6 458 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PID1Q7Z2X4 250 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 KDELC2Q7Z4H8 507 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 CDKL3Q8IVW4 592 aaPredicted RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 PHACTR4Q8IZ21 702 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 SLC25A45Q8N413 288 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 PLA2G15Q8NCC3 412 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 ZNF548Q8NEK5 533 aaPredicted RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 TRIM58Q8NG06 486 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 SPATA22Q8NHS9 363 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 UBE2Q2Q8WVN8 375 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 DTD2Q96FN9 168 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 WDR92Q96MX6 357 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 ALS2CR12Q96Q35 445 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 MLPHQ9BV36 600 aaPredicted RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 WDR26Q9H7D7 661 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 UCKL1Q9NWZ5 548 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 SPASTQ9UBP0 616 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 KLQ9UEF7 1012 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 APOBEC3BQ9UH17 382 aaKnown RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 TRHDEQ9UKU6 1024 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 ANGPTL2Q9UKU9 493 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 COL5A1P20908 1838 aaPredicted RBP10.35□□□□□ -0.75
SDF2-208ENST00000589788 DCHS1Q96JQ0 3298 aa10.35□□□□□ -0.75
SDF2-208ENST00000589788 A0A0U1RQS6 177 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 C1orf232A0A0U1RR37 186 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 ANKRD66B4E2M5 251 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 KIF2AO00139 706 aaPredicted RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 PDE2AO00408 941 aaPredicted RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 DDX3YO15523 660 aaKnown RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 AQP9O43315 295 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 ZNF189O75820 626 aaPredicted RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 RASGRP1O95267 797 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 CTSEP14091 401 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 TSHRP16473 764 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 GM2AP17900 193 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 NFKB1P19838 968 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 KELP23276 732 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 VAMP1P23763 118 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 CDK18Q07002 472 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 GALNT3Q14435 633 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 SLC14A2Q15849 920 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 ESRP1Q6NXG1 681 aaKnown RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 AADACL2Q6P093 401 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 DARS2Q6PI48 645 aaKnown RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 Q6ZVL8 140 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 RD3Q7Z3Z2 195 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 SLCO6A1Q86UG4 719 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 HID1Q8IV36 788 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 RBFAQ8N0V3 343 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 OR4C6Q8NH72 309 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 CCHCR1Q8TD31 782 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 LMX1AQ8TE12 382 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 HES6Q96HZ4 224 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 C16orf45Q96MC5 204 aaPredicted RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 SMIM14Q96QK8 99 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 PHPT1Q9NRX4 125 aaPredicted RBP10.34□□□□□ -0.75
SDF2-208ENST00000589788 NLGN3Q9NZ94 848 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 UBP1Q9NZI7 540 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 FAM153AQ9UHL3 310 aa10.34□□□□□ -0.75
SDF2-208ENST00000589788 RSPH14Q9UHP6 348 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms