RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 AARSD1Q9BTE6 412 aaKnown RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CCDC68Q9H2F9 335 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 UBE2ZQ9H832 354 aaPredicted RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 NMRAL1Q9HBL8 299 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 GTSE1Q9NYZ3 720 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 COPG2Q9UBF2 871 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CRYL1Q9Y2S2 319 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 TBC1D3BA6NDS4 549 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 ERICH4A6NGS2 130 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 EBAG9O00559 213 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 SNX3O60493 162 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 SRP72O76094 671 aaKnown RBP12.01□□□□□ -0.49
CCBE1-203ENST00000589116 KAT7O95251 611 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 WISP3O95389 354 aaPredicted RBP12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PRAMEF1O95521 474 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 CTSLP07711 333 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 BGNP21810 368 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 GRIA2P42262 883 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PTGER3P43115 390 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 MESP2Q0VG99 397 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 HTR4Q13639 388 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 ELAVL3Q14576 367 aaKnown RBP12.01□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF234Q14588 700 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PCLAFQ15004 111 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 FAM83EQ2M2I3 478 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 GPR33Q49SQ1 333 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 LRRC66Q68CR7 880 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PSAPL1Q6NUJ1 521 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 FAM47EQ6ZV65 393 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 SNX20Q7Z614 316 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PIANPQ8IYJ0 282 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 ANKS4BQ8N8V4 417 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 CCDC197Q8NCU1 140 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 TMIEQ8NEW7 156 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 ST13P5Q8NFI4 369 aaPredicted RBP12.01□□□□□ -0.49
CCBE1-203ENST00000589116 KCTD4Q8WVF5 259 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
CCBE1-203ENST00000589116 OR8D1Q8WZ84 308 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PBXIP1Q96AQ6 731 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 PLEKHG4BQ96PX9 1271 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 OLFM1Q99784 485 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 TMEM245Q9H330 911 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 GPAMQ9HCL2 828 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 B4GALT6Q9UBX8 382 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 CD207Q9UJ71 328 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 BPTFQ12830 3046 aa12.01□□□□□ -0.49
CCBE1-203ENST00000589116 TRBV5-4A0A0C4DH59 114 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 GLYATL1P3A0A0U1RQE8 302 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 UBA6A0AVT1 1052 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 ANHXE9PGG2 379 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 GAPDHSO14556 408 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 APODP05090 189 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 LTA4HP09960 611 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 CPA3P15088 417 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 IL9P15248 144 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 BPIP17213 487 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 LHCGRP22888 699 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 SP100P23497 879 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 VIPR1P32241 457 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 PRKAA2P54646 552 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 DMTNQ08495 405 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 NFATC2Q13469 925 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ARHGEF7Q14155 803 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ITIH4Q14624 930 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 LEXMQ3ZCV2 418 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 LRRC8EQ6NSJ5 796 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 KLC3Q6P597 504 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF549Q6P9A3 640 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 SERPINA13PQ6UXR4 307 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 SPATA21Q7Z572 469 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 TSPAN33Q86UF1 283 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 UBXN10Q96LJ8 280 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ELAC2Q9BQ52 826 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 PLCD4Q9BRC7 762 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 MECRQ9BV79 373 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 TSSK1BQ9BXA7 367 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 IL26Q9NPH9 171 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 RAD18Q9NS91 495 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF358Q9NW07 568 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 TAS2R13Q9NYV9 303 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 THAP10Q9P2Z0 257 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 USP15Q9Y4E8 981 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 PCDHB1Q9Y5F3 818 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 NUMBLQ9Y6R0 609 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 A0A0U1RQS6 177 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 NPC1O15118 1278 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 H2AFYO75367 372 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 ESR1P03372 595 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 PRSS56P0CW18 603 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 PKMP14618 531 aaKnown RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 KCNA5P22460 613 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 XPAP23025 273 aaPredicted RBP12□□□□□ -0.49
CCBE1-203ENST00000589116 RPS3P23396 243 aaKnown RBP eCLIP12□□□□□ -0.49
CCBE1-203ENST00000589116 GRK2P25098 689 aa12□□□□□ -0.49
CCBE1-203ENST00000589116 ALDH3A1P30838 453 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms