RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MICALCLQ6ZW33 695 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 SPATS2Q86XZ4 545 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 MPP5Q8N3R9 675 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 FUBP1Q96AE4 644 aaKnown RBP18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 ZNF778Q96MU6 729 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 SPATA16Q9BXB7 569 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 IL22Q9GZX6 179 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 CDH19Q9H159 772 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 IL26Q9NPH9 171 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 SNX11Q9Y5W9 270 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 LRP4O75096 1905 aa18.88■□□□□ 0.61
CLPTM1-209ENST00000588855 GLYATL1P3A0A0U1RQE8 302 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 LNP1A1A4G5 178 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 GAPDHSO14556 408 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 GPR39O43194 453 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 TEAD1P28347 426 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 CTSKP43235 329 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 YPEL5P62699 121 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 PDE1CQ14123 709 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 CSRP2Q16527 193 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 PCID2Q5JVF3 399 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 TSTD2Q5T7W7 516 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 ZDHHC20Q5W0Z9 365 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 AGGF1Q8N302 714 aaeCLIP18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 TRAM1L1Q8N609 369 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 STYXQ8WUJ0 223 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 SKA1Q96BD8 255 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 PWWP2AQ96N64 755 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 LGR4Q9BXB1 951 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 NLE1Q9NVX2 485 aaPredicted RBP18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 GRHL1Q9NZI5 618 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 SLC2A6Q9UGQ3 507 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 ANAPC5Q9UJX4 755 aa18.87■□□□□ 0.61
CLPTM1-209ENST00000588855 FAM186AA6NE01 2351 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 TOR1BO14657 336 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 INPP4BO15327 924 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 GFRA3O60609 400 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 MAGEC1O60732 1142 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 THOP1P52888 689 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 CDK3Q00526 305 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 NFATC4Q14934 902 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 TRADDQ15628 312 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 ADAMTSL4Q6UY14 1074 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 TRIM74Q86UV6 250 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 BBOF1Q8ND07 529 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 ZSCAN5AQ9BUG6 496 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 TEX101Q9BY14 249 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 CHRAC1Q9NRG0 131 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 WHRNQ9P202 907 aa18.86■□□□□ 0.61
CLPTM1-209ENST00000588855 ESYT3A0FGR9 886 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 SMAPO00193 183 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 ARHGAP33O14559 1287 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 BANF1O75531 89 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 PYGLP06737 847 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 ENGP17813 658 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 HADHAP40939 763 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 ARSDP51689 593 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 KIAA1024LP59773 190 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 XIAPP98170 497 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 CALCOCO2Q13137 446 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 LAMB3Q13751 1172 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 CHRNA6Q15825 494 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 FNBP1LQ5T0N5 605 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 PRR23CQ6ZRP0 262 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 OR13J1Q8NGT2 312 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 C19orf43Q9BQ61 176 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 GDF3Q9NR23 364 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 PHPT1Q9NRX4 125 aaPredicted RBP18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 CNOT6Q9ULM6 557 aaKnown RBP18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 GVINP1Q7Z2Y8 2422 aa18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 TDRD6O60522 2096 aaKnown RBP18.85■□□□□ 0.61
CLPTM1-209ENST00000588855 SPTY2D1-AS1A0A0U1RR47 76 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 SDR42E2A6NKP2 422 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 CACNB4O00305 520 aaPredicted RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 NDC80O14777 642 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 PRAMEF1O95521 474 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 MYCLP1P12525 358 aaPredicted RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 PSMA3P25788 255 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 CA5AP35218 305 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 PEX6Q13608 980 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 FZD2Q14332 565 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 MSS51Q4VC12 460 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 ATP13A5Q4VNC0 1218 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 CASC4Q6P4E1 433 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 MACC1Q6ZN28 852 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 DCP2Q8IU60 420 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 OR2I1PQ8NGU4 316 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 SIGLEC10Q96LC7 697 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 TBATAQ96M53 351 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 TRIM56Q9BRZ2 755 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 KIFC1Q9BW19 673 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 GTPBP2Q9BX10 602 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 SUDS3Q9H7L9 328 aaPredicted RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 CAAP1Q9H8G2 361 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 RXFP3Q9NSD7 469 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 DMGDHQ9UI17 866 aaKnown RBP18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 TMPRSS11EQ9UL52 423 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 RIMKLBQ9ULI2 386 aa18.84■□□□□ 0.61
CLPTM1-209ENST00000588855 PNMA8BQ9ULN7 279 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms