RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MTO1Q9Y2Z2 717 aaKnown RBP11.26□□□□□ -0.61
VMP1-207ENST00000588131 SLC30A1Q9Y6M5 507 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 PLXNB3Q9ULL4 1909 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 HMGB1P1B2RPK0 211 aaPredicted RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 H0Y858 1186 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 PSMD11O00231 422 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 NEMP1O14524 444 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 AP1G1O43747 822 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 ITGA2BP08514 1039 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 SNRPAP09012 282 aaKnown RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 C6P13671 934 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 CREB1P16220 341 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 KRT15P19012 456 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 UGT1A6P19224 532 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 UGT1A1P22309 533 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 UGT1A4P22310 534 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 OAS2P29728 719 aaKnown RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 SPRP35270 261 aaPredicted RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 UGT1A3P35503 534 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 UGT1A5P35504 534 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 LEPRP48357 1165 aaKnown RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 CD151P48509 253 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 PTPN5P54829 565 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 MAGOHP61326 146 aaKnown RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 ZXDAP98168 799 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 CACNG1Q06432 222 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 MROH9Q5TGP6 573 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 MRNIPQ6NTE8 343 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 KIAA0408Q6ZU52 694 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 TAS2R42Q7RTR8 314 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 SNX20Q7Z614 316 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 TRABD2AQ86V40 505 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 EXOC3L1Q86VI1 746 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 PJA1Q8NG27 643 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 CXorf40AQ8TE69 158 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 GANCQ8TET4 914 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 DTD2Q96FN9 168 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 VPS39Q96JC1 886 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 SERAC1Q96JX3 654 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 PLEKHG4BQ96PX9 1271 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 KLF6Q99612 283 aaPredicted RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 ABCG8Q9H221 673 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 RHOJQ9H4E5 214 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 ASB8Q9H765 288 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 POLMQ9NP87 494 aaPredicted RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 NFKBIL1Q9UBC1 381 aaPredicted RBP11.25□□□□□ -0.61
VMP1-207ENST00000588131 APPL1Q9UKG1 709 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 TMPRSS11EQ9UL52 423 aa11.25□□□□□ -0.61
VMP1-207ENST00000588131 TRBV5-4A0A0C4DH59 114 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 RGSL1A5PLK6 1076 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 WNT9AO14904 365 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 TSPAN6O43657 245 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 PLRG1O43660 514 aaKnown RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 KRT37O76014 449 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 KRT38O76015 456 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 RECQL5O94762 991 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 ITGALP20701 1170 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 CNTFP26441 200 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 DGKEP52429 567 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 ADPRHP54922 357 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 DCDC1P59894 354 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 CREB5Q02930 508 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 ZBTB16Q05516 673 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 NFATC2Q13469 925 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 DBN1Q16643 649 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 TTC31Q49AM3 519 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 ATP13A5Q4VNC0 1218 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 TMEM31Q5JXX7 168 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 RBM20Q5T481 1227 aaKnown RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 HENMT1Q5T8I9 393 aaKnown RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 LGSNQ5TDP6 509 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 ZDHHC20Q5W0Z9 365 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 SEL1L3Q68CR1 1132 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 TAOK1Q7L7X3 1001 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 GALNT7Q86SF2 657 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 SDCCAG8Q86SQ7 713 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 FAM124AQ86V42 546 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 SRRM1Q8IYB3 904 aaKnown RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 DCLK2Q8N568 766 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 OR14C36Q8NHC7 312 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 GABPB2Q8TAK5 448 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 ZNF398Q8TD17 642 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 LPGAT1Q92604 370 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 CLDN23Q96B33 292 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 MTBPQ96DY7 904 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 CCDC97Q96F63 343 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 HHIPQ96QV1 700 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 NDNQ99608 321 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 GPR22Q99680 433 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 RIOK2Q9BVS4 552 aaKnown RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 STMN4Q9H169 189 aaPredicted RBP11.24□□□□□ -0.61
VMP1-207ENST00000588131 FAM83DQ9H4H8 585 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 CAB39LQ9H9S4 337 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 EBF1Q9UH73 591 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 CRLS1Q9UJA2 301 aa11.24□□□□□ -0.61
VMP1-207ENST00000588131 SCML1Q9UN30 329 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms