RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 OR52K2Q8NGK3 314 aa18.52■□□□□ 0.56
DDX39A-206ENST00000587730 OR10T2Q8NGX3 314 aa18.52■□□□□ 0.56
DDX39A-206ENST00000587730 BRSK1Q8TDC3 778 aa18.52■□□□□ 0.56
DDX39A-206ENST00000587730 ZNF599Q96NL3 588 aa18.52■□□□□ 0.56
DDX39A-206ENST00000587730 ATOH8Q96SQ7 321 aa18.52■□□□□ 0.56
DDX39A-206ENST00000587730 AARSD1Q9BTE6 412 aaKnown RBP18.52■□□□□ 0.56
DDX39A-206ENST00000587730 CATSPERZQ9NTU4 200 aa18.52■□□□□ 0.56
DDX39A-206ENST00000587730 LEF1Q9UJU2 399 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-206ENST00000587730 SAC3D1A6NKF1 404 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 H0YAE9 185 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PFDN6O15212 129 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 EEDO75530 441 aaKnown RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 CAPGP40121 348 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 KCNC1P48547 511 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ARSDP51689 593 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 EMP3P54852 163 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 DSC2Q02487 901 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 SLC10A7Q0GE19 358 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 RCAN2Q14206 197 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 MYBPC3Q14896 1274 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 NOMO2Q5JPE7 1267 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PRAMEF19Q5SWL8 479 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 RPS27LQ71UM5 84 aaKnown RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 GPR180Q86V85 440 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 CHCHD4Q8N4Q1 142 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ARRDC2Q8TBH0 407 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PPP1R13LQ8WUF5 828 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 LPPQ93052 612 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ISOC1Q96CN7 298 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PABPC5Q96DU9 382 aaKnown RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 FUBP3Q96I24 572 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 BTN2A3PQ96KV6 586 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 SLC39A3Q9BRY0 314 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 RETREG1Q9H6L5 497 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 OLA1Q9NTK5 396 aaKnown RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 RIC8BQ9NVN3 520 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 CMTM6Q9NX76 183 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 SMPD3Q9NY59 655 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PKD2L2Q9NZM6 624 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 MARCH4Q9P2E8 410 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 POLG2Q9UHN1 485 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ANAPC2Q9UJX6 822 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PCDHB8Q9UN66 801 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 GPR45Q9Y5Y3 372 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 A0A1W2PQH9 124 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 LCHNA4D1U4 455 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 CLOCKO15516 846 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 SOAT2O75908 522 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PRR35P0CG20 571 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 MAPKAPK2P49137 400 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 STC1P52823 247 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 CLCQ05315 142 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 RAD51Q06609 339 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 NFYCQ13952 458 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PFKFB4Q16877 469 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 PDCD4Q53EL6 469 aaKnown RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 LRRTM3Q86VH5 581 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 BBS5Q8N3I7 341 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 FBXO39Q8N4B4 442 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 DHRSXQ8N5I4 330 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 TMEM125Q96AQ2 219 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ZNF512Q96ME7 567 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 KCTD14Q9BQ13 255 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-206ENST00000587730 CCDC68Q9H2F9 335 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ALG2Q9H553 416 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 TAS2R13Q9NYV9 303 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 ZIM2Q9NZV7 527 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 SUN2Q9UH99 717 aa18.51■□□□□ 0.55
DDX39A-206ENST00000587730 UBXN8O00124 270 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 IFRD1O00458 451 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 GIPC1O14908 333 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 RAMP2O60895 175 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 NOL3O60936 208 aaKnown RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 GOT2P00505 430 aaKnown RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 LDLRP01130 860 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 CYBBP04839 570 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 MTHFD2P13995 350 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 RFC2P35250 354 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 CDH13P55290 713 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 FKBP1BP68106 108 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 FXNQ16595 210 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 NFE2Q16621 373 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 CYP51A1Q16850 503 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 ZNF549Q6P9A3 640 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 PIM3Q86V86 326 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 CLVS1Q8IUQ0 354 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 EPHX4Q8IUS5 362 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 NKAPQ8N5F7 415 aaKnown RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 AADATQ8N5Z0 425 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 OR4L1Q8NH43 312 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 FNDC8Q8TC99 324 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 C8orf48Q96LL4 319 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 PLEKHG4BQ96PX9 1271 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 DOK1Q99704 481 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 MTG1Q9BT17 334 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-206ENST00000587730 BDH2Q9BUT1 245 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 BRINP2Q9C0B6 783 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 AIG1Q9NVV5 245 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 RNF112Q9ULX5 631 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 CRYL1Q9Y2S2 319 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms