RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 ADNPQ9H2P0 1102 aa13.67□□□□□ -0.22
RDH13-209ENST00000587721 GEMIN8Q9NWZ8 242 aaKnown RBP13.67□□□□□ -0.22
RDH13-209ENST00000587721 IL17BQ9UHF5 180 aa13.67□□□□□ -0.22
RDH13-209ENST00000587721 ANAPC7Q9UJX3 599 aa13.67□□□□□ -0.22
RDH13-209ENST00000587721 TMEM98Q9Y2Y6 226 aa13.67□□□□□ -0.22
RDH13-209ENST00000587721 KALRNO60229 2985 aa13.67□□□□□ -0.22
RDH13-209ENST00000587721 AHCTF1Q8WYP5 2266 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 MGAQ8IWI9 3026 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 A0A1B0GTH6 734 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 FZD6O60353 706 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 PDHA1P08559 390 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 MPSTP25325 297 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 UGT1A3P35503 534 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 RPL26P61254 145 aaKnown RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 TPM4P67936 248 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 CYP4F2P78329 520 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 PTSQ03393 145 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 MAP7D3Q8IWC1 876 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 CACNA2D3Q8IZS8 1091 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 SFRP1Q8N474 314 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 AVL9Q8NBF6 648 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 CCHCR1Q8TD31 782 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 PTCD2Q8WV60 388 aaKnown RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 SCAMP4Q969E2 229 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 KIAA1143Q96AT1 154 aaPredicted RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 CATSPER2Q96P56 530 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 EFHD1Q9BUP0 239 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 RMI1Q9H9A7 625 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 RBM22Q9NW64 420 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■□□ 19
RDH13-209ENST00000587721 VPS18Q9P253 973 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 ZNHIT2Q9UHR6 403 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 RPL26L1Q9UNX3 145 aaKnown RBP13.66□□□□□ -0.22
RDH13-209ENST00000587721 TTLL3Q9Y4R7 772 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 B3GALT1Q9Y5Z6 326 aa13.66□□□□□ -0.22
RDH13-209ENST00000587721 EFCAB7A8K855 629 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 MATN3O15232 486 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 INPP4BO15327 924 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 ARHGAP6O43182 974 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 SUV39H1O43463 412 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 SOD1P00441 154 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 TCF4P15884 667 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 ITGB6P18564 788 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 MX2P20592 715 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 CCNCP24863 283 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 CCR10P46092 362 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 STC1P52823 247 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 SLC25A11Q02978 314 aaKnown RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 HHEXQ03014 270 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 GALNT2Q10471 571 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 NFKBIBQ15653 356 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.65□□□□□ -0.22
RDH13-209ENST00000587721 SYN2Q92777 582 aaPredicted RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 FATE1Q969F0 183 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 IQCDQ96DY2 449 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 ZPBPQ9BS86 351 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 HERPUD2Q9BSE4 406 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 NUP85Q9BW27 656 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 SLC12A9Q9BXP2 914 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 TDRD1Q9BXT4 1180 aaKnown RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 THAP2Q9H0W7 228 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 SARS2Q9NP81 518 aaKnown RBP13.65□□□□□ -0.22
RDH13-209ENST00000587721 PLEKHM1Q9Y4G2 1056 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 ST14Q9Y5Y6 855 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 CFAP46Q8IYW2 2715 aa13.65□□□□□ -0.22
RDH13-209ENST00000587721 TRBV23OR9-2A0A075B6M9 112 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 RGSL1A5PLK6 1076 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 OR5K4A6NMS3 321 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 ZNF891A8MT65 544 aaPredicted RBP13.64□□□□□ -0.23
RDH13-209ENST00000587721 RAD1O60671 282 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 SERPING1P05155 500 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
RDH13-209ENST00000587721 CSF2RBP32927 897 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 NR1I3Q14994 352 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 PAFAH1B3Q15102 231 aaKnown RBP13.64□□□□□ -0.23
RDH13-209ENST00000587721 PDK2Q15119 407 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 PTPRRQ15256 657 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 ANKRD20A8PQ5CZ79 823 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 TXNRD3NBQ6F5E7 133 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 ALG1LQ6GMV1 187 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 CEACAM20Q6UY09 585 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 CHST15Q7LFX5 561 aaPredicted RBP13.64□□□□□ -0.23
RDH13-209ENST00000587721 TRIM74Q86UV6 250 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 NLGN4XQ8N0W4 816 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 NLGN4YQ8NFZ3 816 aaPredicted RBP13.64□□□□□ -0.23
RDH13-209ENST00000587721 FAM71BQ8TC56 605 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 SLC37A2Q8TED4 501 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 HTR3CQ8WXA8 447 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 MAML1Q92585 1016 aa13.64□□□□□ -0.23
RDH13-209ENST00000587721 COX14Q96I36 57 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms