RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZDHHC6Q9H6R6 413 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 MUTYHQ9UIF7 546 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 CRYL1Q9Y2S2 319 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 VWA7Q9Y334 891 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 PPIL1Q9Y3C6 166 aa20.37■□□□□ 0.85
ATG4D-204ENST00000586417 A0A087X1B8 175 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 TTC34A8MYJ7 566 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 DNAJC6O75061 913 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 SNNO75324 88 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 SBK3P0C264 359 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 CPA3P15088 417 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 GLULP15104 373 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 CDKN1CP49918 316 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 SLC12A2P55011 1212 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 OCRLQ01968 901 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 IFT88Q13099 833 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 EIF4HQ15056 248 aaKnown RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 MLF2Q15773 248 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 EGFLAMQ63HQ2 1017 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 ATG16L1Q676U5 607 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 C10orf107Q8IVU9 208 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 PIANPQ8IYJ0 282 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 LPGAT1Q92604 370 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 TSPAN17Q96FV3 270 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 TCF12Q99081 682 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 C19orf43Q9BQ61 176 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 ARL2BPQ9Y2Y0 163 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 KRBA1A5PL33 1030 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 KLHL2O95198 593 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 FDXRP22570 491 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 PMLP29590 882 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 SEC13P55735 322 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 TIAL1Q01085 375 aaKnown RBP eCLIP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 FAM45BPQ6NSW5 357 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 PSAPL1Q6NUJ1 521 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 ZCCHC23Q6ZST2 131 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 OR6Y1Q8NGX8 325 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 FAM45AQ8TCE6 357 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 FAM3CQ92520 227 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 NXNL1Q96CM4 212 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 THOC1Q96FV9 657 aaKnown RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 C7orf26Q96N11 449 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 ZNF641Q96N77 438 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 ZFYVE1Q9HBF4 777 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 IGSF5Q9NSI5 407 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 PLA2G4CQ9UP65 541 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 RUVBL2Q9Y230 463 aaKnown RBP20.36■□□□□ 0.85
ATG4D-204ENST00000586417 PKP3Q9Y446 797 aa20.36■□□□□ 0.85
ATG4D-204ENST00000586417 ZNF106Q9H2Y7 1883 aaKnown RBP20.35■□□□□ 0.85
ATG4D-204ENST00000586417 C1orf232A0A0U1RR37 186 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 TARM1B6A8C7 271 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 ASLP04424 464 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 OVGP1Q12889 678 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 ZNF234Q14588 700 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 PREPLQ4J6C6 727 aaPredicted RBP20.35■□□□□ 0.85
ATG4D-204ENST00000586417 MCCC1Q96RQ3 725 aaPredicted RBP20.35■□□□□ 0.85
ATG4D-204ENST00000586417 AARSD1Q9BTE6 412 aaKnown RBP20.35■□□□□ 0.85
ATG4D-204ENST00000586417 C20orf27Q9GZN8 174 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 ZNF395Q9H8N7 513 aaPredicted RBP20.35■□□□□ 0.85
ATG4D-204ENST00000586417 KLHL14Q9P2G3 628 aa20.35■□□□□ 0.85
ATG4D-204ENST00000586417 ATXN2Q99700 1313 aaKnown RBP20.35■□□□□ 0.85
ATG4D-204ENST00000586417 NPIPB15A6NHN6 443 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TK2O00142 265 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 GAPDHSO14556 408 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TGDSO95455 350 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 CLDN7O95471 211 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 UGT2B4P06133 528 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 APOA4P06727 396 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 SRPRAP08240 638 aaKnown RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 CHRM1P11229 460 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 HLA-EP13747 358 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TNFRSF4P43489 277 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 KIR2DL1P43626 348 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 SUOXP51687 545 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 RAD51Q06609 339 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 LRRC8EQ6NSJ5 796 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 SUGP1Q8IWZ8 645 aaKnown RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 FSTL5Q8N475 847 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 SPATA6LQ8N4H0 392 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 C10orf82Q8WW14 230 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 SCRN2Q96FV2 425 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 UBXN10Q96LJ8 280 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TSNARE1Q96NA8 513 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 ARHGEF3Q9NR81 526 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 NDRG2Q9UN36 371 aaKnown RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 MTF2Q9Y483 593 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 WASF2Q9Y6W5 498 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TIE1P35590 1138 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 GLRBP48167 497 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 GRSF1Q12849 480 aaKnown RBP eCLIP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 STX3Q13277 289 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TSNAXIP1Q2TAA8 658 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 FNDC3BQ53EP0 1204 aaKnown RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 CRTC1Q6UUV9 634 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TMEM207Q6UWW9 146 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 YTHDF3Q7Z739 585 aaKnown RBP20.34■□□□□ 0.85
ATG4D-204ENST00000586417 TSPAN33Q86UF1 283 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 PIM3Q86V86 326 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 PAF1Q8N7H5 531 aa20.34■□□□□ 0.85
ATG4D-204ENST00000586417 RDH11Q8TC12 318 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms