RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DOK6Q6PKX4 331 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 SASS6Q6UVJ0 657 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 ZNF765Q7L2R6 523 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 LRRC49Q8IUZ0 686 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 RAVER1Q8IY67 606 aaKnown RBP14.38□□□□□ -0.11
SDF2-202ENST00000585428 BBS5Q8N3I7 341 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 EXD1Q8NHP7 514 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 ZNF564Q8TBZ8 553 aaPredicted RBP14.38□□□□□ -0.11
SDF2-202ENST00000585428 RTP4Q96DX8 246 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 SMIM14Q96QK8 99 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 MRPL47Q9HD33 250 aaKnown RBP14.38□□□□□ -0.11
SDF2-202ENST00000585428 FBXO8Q9NRD0 319 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 GOLGA6AQ9NYA3 693 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 CD84Q9UIB8 345 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 CNOT6Q9ULM6 557 aaKnown RBP14.38□□□□□ -0.11
SDF2-202ENST00000585428 ANKRD36A6QL64 1941 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 ARHGEF17Q96PE2 2063 aaPredicted RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 A0A0J9YYE9 177 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 NKX2-8O15522 239 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 RAD1O60671 282 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 DNAJC6O75061 913 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 PRLP01236 227 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 TRBC1P01850 177 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 ZNF30P17039 623 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 MAP4P27816 1152 aaKnown RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 CCR10P46092 362 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 SMTNL2Q2TAL5 461 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 E4F1Q66K89 784 aaPredicted RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 TIPARPQ7Z3E1 657 aaKnown RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 PTRH1Q86Y79 214 aaKnown RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 NRSN1Q8IZ57 195 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 NDUFAF2Q8N183 169 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 OR10G6Q8NH81 332 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 SLC37A2Q8TED4 501 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 NSMCE1Q8WV22 266 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 HSPH1Q92598 858 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 CATSPER2Q96P56 530 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 TEFMQ96QE5 360 aaKnown RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 WDR24Q96S15 920 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 SLC38A3Q99624 504 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 PCYT1BQ9Y5K3 369 aaPredicted RBP14.37□□□□□ -0.11
SDF2-202ENST00000585428 SCINQ9Y6U3 715 aa14.37□□□□□ -0.11
SDF2-202ENST00000585428 HECTD1Q9ULT8 2610 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 LOC101059948A0A1B0GTJ6 334 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 ZNF891A8MT65 544 aaPredicted RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 PYGLP06737 847 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 MYBL1P10243 752 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 CES1P23141 567 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 STC1P52823 247 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 PIGHQ14442 188 aaPredicted RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 STX1AQ16623 288 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 ALG1LQ6GMV1 187 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 MARK2Q7KZI7 788 aaKnown RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 ZNF761Q86XN6 746 aaPredicted RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 FAM129CQ86XR2 697 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 NLGN4XQ8N0W4 816 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 ATPAF2Q8N5M1 289 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 NLGN4YQ8NFZ3 816 aaPredicted RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 FAM71BQ8TC56 605 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 TEKT4Q8WW24 435 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 ZNF653Q96CK0 615 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 AHCYL2Q96HN2 611 aaKnown RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 ZPBPQ9BS86 351 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 RIOK2Q9BVS4 552 aaKnown RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 PCDH18Q9HCL0 1135 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 SARS2Q9NP81 518 aaKnown RBP14.36□□□□□ -0.11
SDF2-202ENST00000585428 NT5MQ9NPB1 228 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
SDF2-202ENST00000585428 MYO1AQ9UBC5 1043 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 TBC1D29Q9UFV1 150 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 ZNHIT2Q9UHR6 403 aa14.36□□□□□ -0.11
SDF2-202ENST00000585428 MAST4O15021 2626 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 SDK2Q58EX2 2172 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 A6NCN8 305 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 A8MU76 341 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 MAP3K6O95382 1288 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 CLDN7O95471 211 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 CASRP41180 1078 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 HHEXQ03014 270 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 ASIC2Q16515 512 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 SKIDA1Q1XH10 827 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 GALNT13Q8IUC8 556 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 NIPA2Q8N8Q9 360 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 NCSTNQ92542 709 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 MAML1Q92585 1016 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 CTRCQ99895 268 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 EPN3Q9H201 632 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 VPS18Q9P253 973 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 PRKAB1Q9Y478 270 aa14.35□□□□□ -0.11
SDF2-202ENST00000585428 TMEM184BQ9Y519 407 aaPredicted RBP14.35□□□□□ -0.11
SDF2-202ENST00000585428 MATN3O15232 486 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 INPP4BO15327 924 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 DUX1O43812 170 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 ATP1A1P05023 1023 aaKnown RBP14.34□□□□□ -0.11
SDF2-202ENST00000585428 SKILP12757 684 aa14.34□□□□□ -0.11
SDF2-202ENST00000585428 SERPINB6P35237 376 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms