RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FOXM1Q08050 763 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 BTG3Q14201 252 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 CAPRIN1Q14444 709 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TRIM74Q86UV6 250 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 BLOC1S5Q8TDH9 187 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 IGSF8Q969P0 613 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 MYRFLQ96LU7 910 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SEMA3CQ99985 751 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 ABI2Q9NYB9 513 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PTBP2Q9UKA9 531 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 PCDHA9Q9Y5H5 950 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 SCN10AQ9Y5Y9 1956 aa14.15□□□□□ -0.14
CDK5RAP3-237ENST00000585163 C9JVG2 144 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 KPNA6O60684 536 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GJB3O75712 270 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FGF1P05230 155 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 LINC00032P0C843 101 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GFAPP14136 432 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 UGT1A6P19224 532 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CHRM3P20309 590 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OGNP20774 298 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CCT8P50990 548 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 STC1P52823 247 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CDH15P55291 814 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CACNB2Q08289 660 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 LCP2Q13094 533 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DCTN2Q13561 401 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GNASQ5JWF2 1037 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SDHAF4Q5VUM1 108 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FBXL22Q6P050 247 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CXCL17Q6UXB2 119 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DCP1BQ8IZD4 617 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 BRSK1Q8TDC3 778 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TSPEARQ8WU66 669 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CENPNQ96H22 339 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 AARSD1Q9BTE6 412 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ADI1Q9BV57 179 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 POLR1EQ9GZS1 481 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PREBQ9HCU5 417 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 A0A1B0GTL3 188 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FAM149AA5PLN7 773 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TRIM64A6NGJ6 449 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ARPC2O15144 300 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RAMP2O60895 175 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 VPS4BO75351 444 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 EPOP01588 193 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 IGHA2P01877 340 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OXTRP30559 389 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CLCQ05315 142 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MERTKQ12866 999 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SERINC3Q13530 473 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DSC3Q14574 896 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 POLD3Q15054 466 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RPS6KA2Q15349 733 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 IL31Q6EBC2 164 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OGFOD2Q6N063 350 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CMTR2Q8IYT2 770 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ADGRG5Q8IZF4 528 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OR4L1Q8NH43 312 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ADAMTS16Q8TE57 1224 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 KIAA1191Q96A73 305 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 BTN2A3PQ96KV6 586 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 BIRC8Q96P09 236 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 C9orf16Q9BUW7 83 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TRIM54Q9BYV2 358 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FBXO44Q9H4M3 255 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CATSPERZQ9NTU4 200 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CIDEBQ9UHD4 219 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GPR45Q9Y5Y3 372 aa14.14□□□□□ -0.15
CDK5RAP3-237ENST00000585163 A0A087WXM4 84 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 KERAO60938 352 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DUSP11O75319 330 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 AKR1A1P14550 325 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MAGEA8P43361 318 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 EMP3P54852 163 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DDR2Q16832 855 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TYSND1Q2T9J0 566 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PARP15Q460N3 678 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SLC36A3Q495N2 470 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ATP6V0D2Q8N8Y2 350 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TRPV3Q8NET8 790 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TNIP2Q8NFZ5 429 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 STAG3L4Q8TBR4 150 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GALNT8Q9NY28 637 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RIMKLBQ9ULI2 386 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZNF232Q9UNY5 417 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 BTRCQ9Y297 605 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PLXNA3P51805 1871 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 A0A1W2PP18 115 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DRGXA6NNA5 263 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MUSKO15146 869 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GPIP06744 558 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PRR35P0CG20 571 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 C7P10643 843 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RPL10P27635 214 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms