RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TRPV4Q9HBA0 871 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 MRPL40Q9NQ50 206 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 IARS2Q9NSE4 1012 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 MARK1Q9P0L2 795 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PSMD13Q9UNM6 376 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 TRPC5OSA6NMA1 111 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 TARM1B6A8C7 271 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 AP1G1O43747 822 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ZBTB14O43829 449 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 POU3F3P20264 500 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 EPHB1P54762 984 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 SATB1Q01826 763 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 IHHQ14623 411 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PCSK7Q16549 785 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 SLC9B1Q4ZJI4 515 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 VWA5B1Q5TIE3 1220 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 KIAA0408Q6ZU52 694 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 RAPH1Q70E73 1250 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 KDELC2Q7Z4H8 507 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PHTF2Q8N3S3 785 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 GALNT15Q8N3T1 639 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 DLG3Q92796 817 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 FAR2Q96K12 515 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 EXOC2Q96KP1 924 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 MRGPRX2Q96LB1 330 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 LENG8Q96PV6 779 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 MGME1Q9BQP7 344 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 FICDQ9BVA6 458 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ZFP14Q9HCL3 533 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 OBP2AQ9NY56 170 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 NDUFA13Q9P0J0 144 aa14.97□□□□□ -0.01
CDK5RAP3-236ENST00000584991 A0A087X1B8 175 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 SOX1O00570 391 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 TMCC1O94876 653 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 MT-CO1P00395 513 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 CYP17A1P05093 508 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ARSAP15289 507 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 NMBRP28336 390 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ADRA1AP35348 466 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PPARGP37231 505 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 RGRP47804 291 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 GRIA4P48058 902 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PLK1P53350 603 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 WNT3AP56704 352 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 DNAJB13P59910 316 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 RAB10P61026 200 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 USP10Q14694 798 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 GRM3Q14832 879 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PITRM1Q5JRX3 1037 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 RETSATQ6NUM9 610 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 KDELC1Q6UW63 502 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 RNF135Q8IUD6 432 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ST13P4Q8IZP2 240 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ACDQ96AP0 544 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 MSLNLQ96KJ4 702 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 SH3GL3Q99963 347 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 CENPKQ9BS16 269 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 FSD1LQ9BXM9 530 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 EBF3Q9H4W6 596 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 POMKQ9H5K3 350 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 ZNF385DQ9H6B1 395 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 PAPOLBQ9NRJ5 636 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 SLC39A10Q9ULF5 831 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 DENND4AQ7Z401 1863 aa14.96□□□□□ -0.01
CDK5RAP3-236ENST00000584991 LOC100653049A0A140TA62 436 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 KRT34O76011 436 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 TPH1P17752 444 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 PIK3R1P27986 724 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 MTHFRP42898 656 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 IRF9Q00978 393 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 ROR2Q01974 943 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 CYLC2Q14093 348 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 GRM2Q14416 872 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 FUT11Q495W5 492 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 INO80DQ53TQ3 878 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 ALG1LQ6GMV1 187 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 VITQ6UXI7 678 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 PIWIL4Q7Z3Z4 852 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 PGAM4Q8N0Y7 254 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 PYDC1Q8WXC3 89 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 TADA1Q96BN2 335 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 MRPL57Q9BQC6 102 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 EFCAB1Q9HAE3 211 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 VPS45Q9NRW7 570 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 RUVBL2Q9Y230 463 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 CDYLQ9Y232 598 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 MYLKQ15746 1914 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 ANKRD36A6QL64 1941 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 E9PBE3 544 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 K7ERQ8 282 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 TRIM24O15164 1050 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 DENRO43583 198 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 KLHL41O60662 606 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 PIGNO95427 931 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 ADH1CP00326 375 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 AHSGP02765 367 aa14.95□□□□□ -0.02
CDK5RAP3-236ENST00000584991 SLC35E2BP0CK96 405 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms