RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	ZNF248	Q8NDW4	579 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	SPATA22	Q8NHS9	363 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	SCAMP4	Q969E2	229 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	AP2M1	Q96CW1	435 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	MLPH	Q9BV36	600 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	HEMGN	Q9BXL5	484 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	TMEM168	Q9H0V1	697 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	CPNE5	Q9HCH3	593 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	GOLGA6A	Q9NYA3	693 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	SLC17A4	Q9Y2C5	497 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	PCDHB1	Q9Y5F3	818 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	MACROD2	A1Z1Q3	448 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	HACD1	B0YJ81	288 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	PYCARD-AS1	I3L0S3	204 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	FUCA1	P04066	466 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	MPO	P05164	745 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	CEACAM5	P06731	702 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	NFKB1	P19838	968 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	GPR1	P46091	355 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	SPINT3	P49223	89 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	RWDD2B	P57060	319 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	KIF5A	Q12840	1032 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	XRCC4	Q13426	336 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	PCSK7	Q16549	785 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	BROX	Q5VW32	411 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	LYSMD3	Q7Z3D4	306 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	NLRP8	Q86W28	1048 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	GKN2	Q86XP6	184 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	NRSN1	Q8IZ57	195 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	PTCD2	Q8WV60	388 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	HTR3C	Q8WXA8	447 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	EID2B	Q96D98	161 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	WDR24	Q96S15	920 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	AGAP2	Q99490	1192 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	VAT1	Q99536	393 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	OSBPL8	Q9BZF1	889 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	CYP4F12	Q9HCS2	524 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	DOLK	Q9UPQ8	538 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	CAPN6	Q9Y6Q1	641 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	PTPRQ	Q9UMZ3	2332 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	CFAP46	Q8IYW2	2715 aa		13.25	□□□□□ -0.29
SREBF1-223	ENST00000584760	KIF26B	Q2KJY2	2108 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	TENM4	Q6N022	2769 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	GOLGA6L6	A8MZA4	724 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	PMPCB	O75439	489 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	NDST3	O95803	873 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	PYGL	P06737	847 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	IVL	P07476	585 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	PYGM	P11217	842 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	RPIA	P49247	311 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	PCBP4	P57723	403 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	TMPRSS3	P57727	454 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	OTUD4	Q01804	1114 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	RHD	Q02161	417 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	CDK18	Q07002	472 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	LY6D	Q14210	128 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	PERM1	Q5SV97	790 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	HENMT1	Q5T8I9	393 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	AADACL2	Q6P093	401 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	KDELC1	Q6UW63	502 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	TRIM74	Q86UV6	250 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	ZNF567	Q8N184	647 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	TXLNB	Q8N3L3	684 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	CCL4L1	Q8NHW4	92 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	ACTL9	Q8TC94	416 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	SCG3	Q8WXD2	468 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	GLMN	Q92990	594 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	NAT6	Q93015	286 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	COX14	Q96I36	57 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	RIOK2	Q9BVS4	552 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	SEMA4C	Q9C0C4	833 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	CARS2	Q9HA77	564 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	UBP1	Q9NZI7	540 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	SIRPG	Q9P1W8	387 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	ZNF711	Q9Y462	761 aa		13.24	□□□□□ -0.29
SREBF1-223	ENST00000584760	CPED1	A4D0V7	1026 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	RGSL1	A5PLK6	1076 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	FADS2P1	A8MWK0	482 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	PIRT	P0C851	137 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	POLD2	P49005	469 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	GSDMD	P57764	484 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	DCDC1	P59894	354 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	PEX26	Q7Z412	305 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	KDELC2	Q7Z4H8	507 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	SFTPA2	Q8IWL1	248 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	SYCE1	Q8N0S2	351 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	GPR156	Q8NFN8	814 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	MAPK15	Q8TD08	544 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	GPBAR1	Q8TDU6	330 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	SCARF2	Q96GP6	870 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	HIC2	Q96JB3	615 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	ZNF578	Q96N58	590 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	FCRL5	Q96RD9	977 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	ZFYVE1	Q9HBF4	777 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	MAGEE1	Q9HCI5	957 aa		13.23	□□□□□ -0.29
SREBF1-223	ENST00000584760	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms