RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 NPIPB15A6NHN6 443 aaPredicted RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 OR5K4A6NMS3 321 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 TTLL8A6PVC2 850 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 RECKO95980 971 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 ZNF30P17039 623 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 ERCC2P18074 760 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 LHCGRP22888 699 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 PMS2P54278 862 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 RPL7AP62424 266 aaKnown RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 NFATC2Q13469 925 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 ARMC12Q5T9G4 340 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 ATP1A1-AS1Q5TC04 95 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 PPP1R2P3Q6NXS1 205 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 CYB5D1Q6P9G0 228 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 MARK2Q7KZI7 788 aaKnown RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 NLRP8Q86W28 1048 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 PSTKQ8IV42 348 aaKnown RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 EXD1Q8NHP7 514 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 SSC4DQ8WTU2 575 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 SEC14L1Q92503 715 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 STAMBPL1Q96FJ0 436 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 MCCC1Q96RQ3 725 aaPredicted RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 PCDHB18PQ96TA0 734 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 APMAPQ9HDC9 416 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 FAM207AQ9NSI2 230 aaPredicted RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 CUEDC1Q9NWM3 386 aaPredicted RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 VPS18Q9P253 973 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 CNOT8Q9UFF9 292 aaKnown RBP13.26□□□□□ -0.29
COPS3-218ENST00000584216 TMEM98Q9Y2Y6 226 aa13.26□□□□□ -0.29
COPS3-218ENST00000584216 TRBV23OR9-2A0A075B6M9 112 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 TCRBV5S1A1TA0A578 114 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 TOX3O15405 576 aaPredicted RBP13.25□□□□□ -0.29
COPS3-218ENST00000584216 RNF8O76064 485 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 PGLSO95336 258 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 ASMTLO95671 621 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 CCNYL3P0C7X3 344 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 PSMA2P25787 234 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 MAPK9P45984 424 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 HCAR3P49019 387 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 UBE2HP62256 183 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 FOXM1Q08050 763 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 SLC10A7Q0GE19 358 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 ERV3-1Q14264 604 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 IL11RAQ14626 422 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 PPP6R3Q5H9R7 873 aaPredicted RBP13.25□□□□□ -0.29
COPS3-218ENST00000584216 CT47A1Q5JQC4 288 aaPredicted RBP13.25□□□□□ -0.29
COPS3-218ENST00000584216 CAPRIN2Q6IMN6 1127 aaKnown RBP13.25□□□□□ -0.29
COPS3-218ENST00000584216 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 ARHGAP36Q6ZRI8 547 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 TECPR1Q7Z6L1 1165 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 RAVER1Q8IY67 606 aaKnown RBP13.25□□□□□ -0.29
COPS3-218ENST00000584216 NPWQ8N729 165 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 MGME1Q9BQP7 344 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 RMI1Q9H9A7 625 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 NOD2Q9HC29 1040 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 GPATCH2LQ9NWQ4 482 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 KLHL3Q9UH77 587 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 ZNHIT2Q9UHR6 403 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 CROTQ9UKG9 612 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
COPS3-218ENST00000584216 MN1Q10571 1320 aaPredicted RBP13.24□□□□□ -0.29
COPS3-218ENST00000584216 LILRA5A6NI73 299 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 PRPSAP2O60256 369 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 KATNA1O75449 491 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 SOD1P00441 154 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 MT-ND3P03897 115 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 CCDC172P0C7W6 258 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 NR1D1P20393 614 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 CHST15Q7LFX5 561 aaPredicted RBP13.24□□□□□ -0.29
COPS3-218ENST00000584216 TSPAN33Q86UF1 283 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 PHYKPLQ8IUZ5 450 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 CPT1CQ8TCG5 803 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
COPS3-218ENST00000584216 TWSG1Q9GZX9 223 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 ABCG8Q9H221 673 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 PARVAQ9NVD7 372 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 HAUS2Q9NVX0 235 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 SIDT1Q9NXL6 827 aaKnown RBP13.24□□□□□ -0.29
COPS3-218ENST00000584216 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 CD84Q9UIB8 345 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 PPIL1Q9Y3C6 166 aa13.24□□□□□ -0.29
COPS3-218ENST00000584216 MRPS18BQ9Y676 258 aaKnown RBP13.24□□□□□ -0.29
COPS3-218ENST00000584216 MYO9AB2RTY4 2548 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 CDC14CA4D256 554 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 DDAH2O95865 285 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 F3P13726 295 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 GNLYP22749 145 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 CASP14P31944 242 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 GARSP41250 739 aaKnown RBP13.23□□□□□ -0.29
COPS3-218ENST00000584216 UQCRFS1P47985 274 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 TRAF2Q12933 501 aa13.23□□□□□ -0.29
COPS3-218ENST00000584216 CA9Q16790 459 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms