RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PKDREJQ9NTG1 2253 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 TNFRSF10CO14798 259 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 PEX11BO96011 259 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 HOXC4P09017 264 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 TPM1P09493 284 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 H2AFZP0C0S5 128 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 CYP2A6P11509 494 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 HNRNPH3P31942 346 aaKnown RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 VIPR1P32241 457 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 ACOX1Q15067 660 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 PDK2Q15119 407 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 H2AFVQ71UI9 128 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 NDUFAF2Q8N183 169 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 ARL10Q8N8L6 244 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 OR6C4Q8NGE1 309 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 OR56A4Q8NGH8 313 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 PCDH19Q8TAB3 1148 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 FAM71BQ8TC56 605 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 CPT1CQ8TCG5 803 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 JPH3Q8WXH2 748 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 NUS1Q96E22 293 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 XPO4Q9C0E2 1151 aaKnown RBP11.12□□□□□ -0.63
CCDC47-206ENST00000584112 DEF6Q9H4E7 631 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 WDR26Q9H7D7 661 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 SEPT10Q9P0V9 454 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 CTTNBP2NLQ9P2B4 639 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 GULP1Q9UBP9 304 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 ACSL6Q9UKU0 697 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 PADI4Q9UM07 663 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 GPR34Q9UPC5 381 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 PCDHGC4Q9Y5F7 938 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 DGKBQ9Y6T7 804 aa11.12□□□□□ -0.63
CCDC47-206ENST00000584112 A8MX80 341 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PSMD11O00231 422 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 AGRPO00253 132 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PROSCO94903 275 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 UGT1A5P35504 534 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 GJC1P36383 396 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 TRIM23P36406 574 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 ARHGEF7Q14155 803 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 SPIDRQ14159 915 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 DPYSL3Q14195 570 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 CNGA3Q16281 694 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 SLC18A3Q16572 532 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PERM1Q5SV97 790 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 ARMC12Q5T9G4 340 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 SPECC1LQ69YQ0 1117 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PNCKQ6P2M8 343 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 USP45Q70EL2 814 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PGBD5Q8N414 524 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 TEX26Q8N6G2 289 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 TEX19Q8NA77 164 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 KYQ8NBH2 561 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 KCTD6Q8NC69 237 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PLA2G15Q8NCC3 412 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 FUBP1Q96AE4 644 aaKnown RBP11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PDXPQ96GD0 296 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 COQ10AQ96MF6 247 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 NSMCE3Q96MG7 304 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 CCDC3Q9BQI4 270 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 ZNF670Q9BS34 389 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 POLR1EQ9GZS1 481 aaKnown RBP11.11□□□□□ -0.63
CCDC47-206ENST00000584112 NOD2Q9HC29 1040 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 NT5MQ9NPB1 228 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 PHPT1Q9NRX4 125 aaPredicted RBP11.11□□□□□ -0.63
CCDC47-206ENST00000584112 ZNHIT6Q9NWK9 470 aaKnown RBP11.11□□□□□ -0.63
CCDC47-206ENST00000584112 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 AMACRQ9UHK6 382 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 NENFQ9UMX5 172 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 ENTPD4Q9Y227 616 aa11.11□□□□□ -0.63
CCDC47-206ENST00000584112 SSU72P8A0A1W2PR75 194 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 TMEM202A6NGA9 273 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 TTLL8A6PVC2 850 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 PLD2O14939 933 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MFSD11O43934 449 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 HEXIM1O94992 359 aaKnown RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 PGLSO95336 258 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 CELA2BP08218 269 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 CD48P09326 243 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 PYGBP11216 843 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MYCLP1P12525 358 aaPredicted RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 GM2AP17900 193 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 CA4P22748 312 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 CES1P23141 567 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 IL4RP24394 825 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MAN1A1P33908 653 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
CCDC47-206ENST00000584112 ARSEP51690 589 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MAXP61244 160 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 ITKQ08881 620 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 GALNT2Q10471 571 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 TRAF2Q12933 501 aa11.1□□□□□ -0.63
CCDC47-206ENST00000584112 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms