RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 NOBOXO60393 691 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PRAMEF11O60813 436 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LRCH4O75427 683 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 WISP1O95388 367 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PRKCGP05129 697 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PNLIPP16233 465 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 GLB1P16278 677 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SERPINA4P29622 427 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ECHS1P30084 290 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MIPP30301 263 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HTR7P34969 479 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CSNK1DP48730 415 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FNTAP49354 379 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ARSEP51690 589 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 NDST2P52849 883 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SLC25A11Q02978 314 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 NFATC3Q12968 1075 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DHX34Q14147 1143 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ARHGEF7Q14155 803 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CASP8Q14790 479 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TGIF1Q15583 401 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CCNG2Q16589 344 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HADHQ16836 314 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MAP9Q49MG5 647 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 C14orf28Q4W4Y0 310 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MANEAQ5SRI9 462 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CERCAMQ5T4B2 595 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 OGFOD3Q6PK18 319 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MFSD7Q6UXD7 560 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SRLQ86TD4 932 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FAM46DQ8NEK8 389 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 OR56A4Q8NGH8 313 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 IFT81Q8WYA0 676 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.72□□□□□ -0.854e-10■□□□□ 9.4
CDK5RAP3-227ENST00000583352 OR1E3Q8WZA6 343 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CAVIN3Q969G5 261 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RNF25Q96BH1 459 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RUNDC3BQ96NL0 473 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CMKLR1Q99788 373 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ERP44Q9BS26 406 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HEMGNQ9BXL5 484 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ATP13A3Q9H7F0 1226 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 VIPAS39Q9H9C1 493 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PDFQ9HBH1 243 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 EFR3BQ9Y2G0 817 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 GCN1Q92616 2671 aaKnown RBP9.71□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ESYT3A0FGR9 886 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TMEM202A6NGA9 273 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 B4DGG1 531 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 J3KR12 359 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 TNFRSF10CO14798 259 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RECQL5O94762 991 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ITGB2P05107 769 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KRT7P08729 469 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HOXC4P09017 264 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM153BP0C7A2 387 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ELFN1P0C7U0 828 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KRT10P13645 584 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ITIH1P19827 911 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KDELR1P24390 212 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CDKN2BP42772 138 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SSR1P43307 286 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KCNJ1P48048 391 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 MAPK10P53779 464 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DR1Q01658 176 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 BCL2L1Q07817 233 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ADCY2Q08462 1091 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RALGDSQ12967 914 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CUL1Q13616 776 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LLGL1Q15334 1064 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LINC00303Q3SY05 128 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM153CQ494X1 144 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 KCTD16Q68DU8 428 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 EMBQ6PCB8 327 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SPOCD1Q6ZMY3 1216 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CYP4V2Q6ZWL3 525 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SPRED1Q7Z699 444 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZSWIM9Q86XI8 627 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 GSPT2Q8IYD1 628 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 EXD3Q8N9H8 876 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 ZSCAN1Q8NBB4 408 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 PLA2G15Q8NCC3 412 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 C1orf54Q8WWF1 131 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SLCO2A1Q92959 643 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FUBP1Q96AE4 644 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 RBM41Q96IZ5 413 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CELF6Q96J87 481 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 CINPQ9BW66 212 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SLC39A8Q9C0K1 460 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 DPEP2Q9H4A9 486 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 SP110Q9HB58 689 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FGF22Q9HCT0 170 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 MRPL40Q9NQ50 206 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 HOMER3Q9NSC5 361 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 AKAP7Q9P0M2 348 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 LRIT1Q9P2V4 623 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
CDK5RAP3-227ENST00000583352 MOSPD1Q9UJG1 213 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms