RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PTPRCP08575 1304 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 SCRIBQ14160 1630 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 PMS2P5A8MQ11 134 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 SNAP23O00161 211 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 VCYO14598 125 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 ZNHIT1O43257 154 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 SPINT2O43291 252 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 PAX1P15863 534 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 CPOXP36551 454 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 PAFAH1B1P43034 410 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 HOXA1P49639 335 aaPredicted RBP3.87□□□□□ -1.79
COPS3-217ENST00000583160 MMP14P50281 582 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 ERVK11-1P61568 191 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 DRAP1Q14919 205 aaPredicted RBP3.87□□□□□ -1.79
COPS3-217ENST00000583160 GSTA3Q16772 222 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 USP41Q3LFD5 358 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 TMEM35AQ53FP2 167 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 C6orf141Q5SZD1 244 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 FAM69AQ5T7M9 428 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 FRG2Q64ET8 278 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 TTI2Q6NXR4 508 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 FAM171BQ6P995 826 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 CADM4Q8NFZ8 388 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 OR5R1Q8NH85 324 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 RNF125Q96EQ8 232 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 TMEM47Q9BQJ4 181 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 NEURL2Q9BR09 285 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 SEBOXQ9HB31 216 aaPredicted RBP3.87□□□□□ -1.79
COPS3-217ENST00000583160 SLC6A13Q9NSD5 602 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 HCFC1R1Q9NWW0 138 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 RRN3Q9NYV6 651 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 SARDHQ9UL12 918 aa3.87□□□□□ -1.79
COPS3-217ENST00000583160 HOXC11O43248 304 aaPredicted RBP3.86□□□□□ -1.79
COPS3-217ENST00000583160 POLR2CP19387 275 aaPredicted RBP3.86□□□□□ -1.79
COPS3-217ENST00000583160 ABCD1P33897 745 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 FASLGP48023 281 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 AMPHP49418 695 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 RGS19P49795 217 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 NR0B1P51843 470 aaKnown RBP3.86□□□□□ -1.79
COPS3-217ENST00000583160 TAS2R38P59533 333 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 NEXNQ0ZGT2 675 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 GRIK2Q13002 908 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 ALG11Q2TAA5 492 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 PRICKLE4Q2TBC4 344 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 TMEM30BQ3MIR4 351 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 C14orf177Q52M58 125 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 CCNYL2Q5T2Q4 361 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 CCDC13Q8IYE1 715 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 KLHDC9Q8NEP7 349 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 CTCFLQ8NI51 663 aaPredicted RBP3.86□□□□□ -1.79
COPS3-217ENST00000583160 FAM76AQ8TAV0 307 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 RBM4Q9BWF3 364 aaKnown RBP3.86□□□□□ -1.79
COPS3-217ENST00000583160 BRF2Q9HAW0 419 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 ASAH2Q9NR71 780 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 ACSS1Q9NUB1 689 aaPredicted RBP3.86□□□□□ -1.79
COPS3-217ENST00000583160 PADI3Q9ULW8 664 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
COPS3-217ENST00000583160 CTAGE9A4FU28 777 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 CTAGE8P0CG41 777 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 NR1D1P20393 614 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 PTP4A2Q12974 167 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 GAGE5Q13069 117 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 GAGE6Q13070 117 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 BIRC3Q13489 604 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 DCST1Q5T197 706 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 SLC9C2Q5TAH2 1124 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 RAD9BQ6WBX8 426 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 CACNA2D4Q7Z3S7 1137 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 GPR180Q86V85 440 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 CTAGE4Q8IX94 777 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 ACVR1CQ8NER5 493 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 OR10V1Q8NGI7 309 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 HTRA1Q92743 480 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 ZNF524Q96C55 264 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 ST6GAL2Q96JF0 529 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 EIF2AK1Q9BQI3 630 aaKnown RBP3.85□□□□□ -1.79
COPS3-217ENST00000583160 PCGF1Q9BSM1 259 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 C1QTNF5Q9BXJ0 243 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 BARHL1Q9BZE3 327 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 PRKRIP1Q9H875 184 aaPredicted RBP3.85□□□□□ -1.79
COPS3-217ENST00000583160 KIF9Q9HAQ2 790 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 UPF2Q9HAU5 1272 aaKnown RBP3.85□□□□□ -1.79
COPS3-217ENST00000583160 HAO1Q9UJM8 370 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 KLHL20Q9Y2M5 609 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 NCAPD3P42695 1498 aa3.85□□□□□ -1.79
COPS3-217ENST00000583160 IGLV5-45A0A087WSX0 123 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 CCDC196A0A1B0GTZ2 297 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 RRN3P2A6NIE6 340 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 F9P00740 461 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 FAM106CPP0CH98 169 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 ARL1P40616 181 aaPredicted RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 MAPK9P45984 424 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 PPM1FP49593 454 aaPredicted RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 CTCFP49711 727 aaPredicted RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 RPL24P83731 157 aaKnown RBP3.84□□□□□ -1.79
COPS3-217ENST00000583160 DECR1Q16698 335 aa3.84□□□□□ -1.79
COPS3-217ENST00000583160 C18orf63Q68DL7 685 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms