RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 PRAMEF11O60813 436 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 CBX6O95503 412 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 PPP1R2P41236 205 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 SEPHS1P49903 392 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 NDST2P52849 883 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 EPHA4P54764 986 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 HDAC4P56524 1084 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 BPIFB4P59827 614 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 RPS18P62269 152 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 EXOC3L4Q17RC7 722 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 TAF3Q5VWG9 929 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 Q6ZVL8 140 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 STRADAQ7RTN6 431 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 HSD11B1LQ7Z5J1 315 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 TRIM74Q86UV6 250 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 PLXDC1Q8IUK5 500 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 FMR1NBQ8N0W7 255 aaPredicted RBP12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 UMODL1-AS1Q8N2C9 162 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 MSANTD4Q8NCY6 345 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 NTAN1Q96AB6 310 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 SH3KBP1Q96B97 665 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 C9orf72Q96LT7 481 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 TBC1D10AQ9BXI6 508 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 KCTD5Q9NXV2 234 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 NAV3Q8IVL0 2385 aa12.47□□□□□ -0.41
CSNK1D-218ENST00000581655 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 WASH4PA8MWX3 477 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 C21orf140B9A014 251 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 CREB3O43889 395 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 SPAG6O75602 509 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 PALMO75781 387 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 CYP11B1P15538 503 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 PON1P27169 355 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 TEAD1P28347 426 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 VIPR1P32241 457 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 GPR1P46091 355 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 LRP8Q14114 963 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 IL11RAQ14626 422 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 UGT8Q16880 541 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 IYDQ6PHW0 289 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 SLFN11Q7Z7L1 901 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 SLC9B2Q86UD5 537 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 GALNT13Q8IUC8 556 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 FAM71AQ8IYT1 594 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 RBMXL3Q8N7X1 1067 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 CPA5Q8WXQ8 436 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 SEC14L1Q92503 715 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 PNPLA2Q96AD5 504 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 EPB41L1Q9H4G0 881 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 CATSPERBQ9H7T0 1116 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 SIX2Q9NPC8 291 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 ASF1BQ9NVP2 202 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 TBC1D29Q9UFV1 150 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 MAN1B1Q9UKM7 699 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 ENTPD4Q9Y227 616 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 PCDHGB7Q9Y5F8 929 aa12.46□□□□□ -0.41
CSNK1D-218ENST00000581655 AKAP9Q99996 3911 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 GOLGA6L3A6NEY3 463 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 ANKUB1A6NFN9 424 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 C2CD4BA6NLJ0 364 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 TIAF1O95411 115 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 SOD1P00441 154 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 C9P02748 559 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 MT-ND3P03897 115 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 FGF5P12034 268 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 LHCGRP22888 699 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 PTGIRP43119 386 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 PTPN9P43378 593 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 SCNN1BP51168 640 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 IL10RAQ13651 578 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 KRTAP21-3Q3LHN1 58 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 NAA35Q5VZE5 725 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 CREBRFQ8IUR6 639 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 MCEMP1Q8IX19 187 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 RHOT1Q8IXI2 618 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 CBARPQ8N350 705 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 CELF6Q96J87 481 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 RANBP9Q96S59 729 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 CINPQ9BW66 212 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 LRRC19Q9H756 370 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 AKIRIN1Q9H9L7 192 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 PRKAB1Q9Y478 270 aa12.45□□□□□ -0.42
CSNK1D-218ENST00000581655 PCNX1Q96RV3 2341 aa12.44□□□□□ -0.42
CSNK1D-218ENST00000581655 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-218ENST00000581655 LILRA5A6NI73 299 aa12.44□□□□□ -0.42
CSNK1D-218ENST00000581655 CEACAM4O75871 244 aa12.44□□□□□ -0.42
CSNK1D-218ENST00000581655 LSM8O95777 96 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms