RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CNBD1Q8NA66 436 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 ABTB1Q969K4 478 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 KLHL29Q96CT2 875 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 RNF125Q96EQ8 232 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 H2AFJQ9BTM1 129 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC25A18Q9H1K4 315 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 KCNN2Q9H2S1 579 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 MPP6Q9NZW5 540 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 A4GNTQ9UNA3 340 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 SCINQ9Y6U3 715 aa3.23□□□□□ -1.89
SMCHD1-206ENST00000581631 A0A1W2PNU3 283 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 SEC14L5O43304 696 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 SEC31AO94979 1220 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 INHBAP08476 426 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 S1PR1P21453 382 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 ABCD3P28288 659 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 DDIT3P35638 169 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 USP8P40818 1118 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 PAFAH1B1P43034 410 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 GNAQP50148 359 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 NEXNQ0ZGT2 675 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 NAE1Q13564 534 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 COL28A1Q2UY09 1125 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 CCNYL2Q5T2Q4 361 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC35E4Q6ICL7 350 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 RGMBQ6NW40 437 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 ZNF852Q6ZMS4 543 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 KRBA2Q6ZNG9 492 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 QSOX2Q6ZRP7 698 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 HEATR4Q86WZ0 1026 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 APLFQ8IW19 511 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 SPATA6LQ8N4H0 392 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 SRBD1Q8N5C6 995 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 ESX1Q8N693 406 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 OR2AK2Q8NG84 335 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 ZNF583Q96ND8 569 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 LRRC1Q9BTT6 524 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 CDK19Q9BWU1 502 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 NDST4Q9H3R1 872 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 PLEKHA4Q9H4M7 779 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 PPP1R3EQ9H7J1 279 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 PPP1R14DQ9NXH3 145 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 KCND2Q9NZV8 630 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 SARDHQ9UL12 918 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 ARHGAP26Q9UNA1 814 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 KCNK7Q9Y2U2 307 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 LRRFIP2Q9Y608 721 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 RNF215Q9Y6U7 377 aa3.22□□□□□ -1.89
SMCHD1-206ENST00000581631 TPD52L2O43399 206 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 MAOAP21397 527 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 ABCD1P33897 745 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 TMPOP42166 694 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 METAP2P50579 478 aaKnown RBP eCLIP3.21□□□□□ -1.91e-11■■■□□ 15
SMCHD1-206ENST00000581631 TUBP50607 506 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 CLCNKAP51800 687 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 BAK1Q16611 211 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 PRICKLE4Q2TBC4 344 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 IRAK1BP1Q5VVH5 260 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 CEACAM20Q6UY09 585 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 SLC46A3Q7Z3Q1 461 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 HAPLN4Q86UW8 402 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 ZNF248Q8NDW4 579 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 MORC4Q8TE76 937 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 DUSP19Q8WTR2 217 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 TMEM190Q8WZ59 177 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 ST8SIA4Q92187 359 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 FSD1Q9BTV5 496 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 HINT3Q9NQE9 182 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 TTC7AQ9ULT0 858 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 ADAMTS9Q9P2N4 1935 aa3.21□□□□□ -1.9
SMCHD1-206ENST00000581631 CCDC196A0A1B0GTZ2 297 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 A0A1W2PQM1 296 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 BLOC1S5-TXNDC5H3BN57 136 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 TAF4O00268 1085 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 NR5A2O00482 541 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 TNFSF14O43557 240 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 FTCDO95954 541 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 F9P00740 461 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 XBP1P17861 261 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 BDKRB2P30411 391 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 GABRB2P47870 512 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 CTCFP49711 727 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 FOXD4Q12950 439 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 PTP4A2Q12974 167 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 FGFBP1Q14512 234 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 ALG11Q2TAA5 492 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 GGNBP1Q5YKI7 109 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 METTL2BQ6P1Q9 378 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 KCTD18Q6PI47 426 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 SMAP1Q8IYB5 467 aaPredicted RBP3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 ZNF34Q8IZ26 560 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 MAGEC3Q8TD91 643 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 PPM1EQ8WY54 764 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 CDCA5Q96FF9 252 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 METTL2AQ96IZ6 378 aaKnown RBP3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 SLC41A2Q96JW4 573 aa3.2□□□□□ -1.9
SMCHD1-206ENST00000581631 PSMD1Q99460 953 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms