RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SNX8Q9Y5X2 465 aa4.72□□□□□ -1.65
SMCHD1-205ENST00000581383 TMCC2O75069 709 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 CH25HO95992 272 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 TUBBP07437 444 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 ANXA7P20073 488 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 C21orf33P30042 268 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 STX2P32856 288 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 EIF2DP41214 584 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 AMTP48728 403 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 TAS2R40P59535 323 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 ACSM2AQ08AH3 577 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 ACSM2BQ68CK6 577 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 DLK2Q6UY11 383 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 CFAP77Q6ZQR2 320 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 TAOK1Q7L7X3 1001 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 OR8H2Q8N162 312 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 PELI3Q8N2H9 469 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 POC5Q8NA72 575 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 OR8K5Q8NH50 307 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 OR14A16Q8NHC5 309 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 KXD1Q9BQD3 176 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 CWC15Q9P013 229 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 POLG2Q9UHN1 485 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 CMAHPQ9Y471 501 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 TTLL3Q9Y4R7 772 aa4.71□□□□□ -1.66
SMCHD1-205ENST00000581383 A8MV72 311 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 CDRT15L2A8MXV6 281 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 NDUFS7O75251 213 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 GPC4O75487 556 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 PGM3O95394 542 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 SELLP14151 372 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 HOXA11P31270 313 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 ARRB2P32121 409 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 PRCPP42785 496 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 SLC15A1P46059 708 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 PCYT1AP49585 367 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 IFI35P80217 286 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 ZBED6P86452 979 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 Q0VFX4 171 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 GRIK2Q13002 908 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 CDC16Q13042 620 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 BECN1Q14457 450 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 SOWAHCQ53LP3 525 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 TMEM198Q66K66 360 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 DUS1LQ6P1R4 473 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 CACNA2D4Q7Z3S7 1137 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 FOXRED2Q8IWF2 684 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 DCP1BQ8IZD4 617 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 GRAMD2BQ96HH9 432 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 ZNF479Q96JC4 524 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 SH3GL2Q99962 352 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 SLC25A33Q9BSK2 321 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 PIGMQ9H3S5 423 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 PDE7BQ9NP56 450 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 MMP25Q9NPA2 562 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 PLSCR4Q9NRQ2 329 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 COPG2Q9UBF2 871 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 CLIC4Q9Y696 253 aa4.7□□□□□ -1.66
SMCHD1-205ENST00000581383 ARHGEF40Q8TER5 1519 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 TIMM44O43615 452 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 ENTPD3O75355 529 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 ERAL1O75616 437 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 SERPINI2O75830 405 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 EGFP01133 1207 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 DDX5P17844 614 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 SAT1P21673 171 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 PON1P27169 355 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 ACADLP28330 430 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 BDKRB2P30411 391 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 HOXA13P31271 388 aaPredicted RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 KRT20P35900 424 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 RAD23BP54727 409 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 LRMPQ12912 555 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 PNLIPRP3Q17RR3 467 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 PCGF3Q3KNV8 242 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 TDRD12Q587J7 1177 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 PPP6R3Q5H9R7 873 aaPredicted RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 CAPRIN2Q6IMN6 1127 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 SDCCAG8Q86SQ7 713 aaPredicted RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 FJX1Q86VR8 437 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 SCML4Q8N228 414 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 APBB2Q92870 758 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 ERP27Q96DN0 273 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 MED30Q96HR3 178 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 EGLN2Q96KS0 407 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 CAMK1GQ96NX5 476 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 MEIS3Q99687 375 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 MMTAG2Q9BU76 263 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 C17orf75Q9HAS0 396 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 SEBOXQ9HB31 216 aaPredicted RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 LTB4R2Q9NPC1 389 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 NOX4Q9NPH5 578 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 MTMR10Q9NXD2 777 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 OR14J1Q9UGF5 321 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 TINAGQ9UJW2 476 aa4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 AGO1Q9UL18 857 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-205ENST00000581383 MYO6Q9UM54 1294 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms