RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 ACTR1AP61163 376 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 PRKD1Q15139 912 aaPredicted RBP20.02■□□□□ 0.8
SMG8-204ENST00000580498 TAZQ16635 292 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 ZNF569Q5MCW4 686 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 BROXQ5VW32 411 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 SLC30A9Q6PML9 568 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 C19orf48Q6RUI8 117 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 KDELC2Q7Z4H8 507 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 ZC3H18Q86VM9 953 aaKnown RBP20.02■□□□□ 0.8
SMG8-204ENST00000580498 SYCE1Q8N0S2 351 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 PELI3Q8N2H9 469 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 ZNF248Q8NDW4 579 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 TEKT5Q96M29 485 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 ZSCAN5AQ9BUG6 496 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 TAAR2Q9P1P5 351 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 TRHDEQ9UKU6 1024 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 H7C0C1 242 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 PMPCBO75439 489 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 DXOO77932 396 aaKnown RBP20.01■□□□□ 0.79
SMG8-204ENST00000580498 SLC4A1P02730 911 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ADCY8P40145 1251 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ATP5OP48047 213 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 PPM1FP49593 454 aaPredicted RBP20.01■□□□□ 0.79
SMG8-204ENST00000580498 VAV2P52735 878 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 INHBCP55103 352 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 RWDD2BP57060 319 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 KIF5AQ12840 1032 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 XRCC4Q13426 336 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 PTPRRQ15256 657 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 PDPK2PQ6A1A2 396 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ITPRIPL1Q6GPH6 555 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 FOXR1Q6PIV2 292 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 MARK2Q7KZI7 788 aaKnown RBP20.01■□□□□ 0.79
SMG8-204ENST00000580498 PID1Q7Z2X4 250 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 UBL4BQ8N7F7 174 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 Q8N9G6 341 aaPredicted RBP20.01■□□□□ 0.79
SMG8-204ENST00000580498 HTR3CQ8WXA8 447 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ATXN7L3BQ96GX2 97 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 SPATA16Q9BXB7 569 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ZMYND15Q9H091 742 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 GOLPH3Q9H4A6 298 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 TRABDQ9H4I3 376 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 EPB41L5Q9HCM4 733 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ZNHIT2Q9UHR6 403 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 SATB2Q9UPW6 733 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 EFR3BQ9Y2G0 817 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 PCDHGA8Q9Y5G5 932 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 ENTPD2Q9Y5L3 495 aa20.01■□□□□ 0.79
SMG8-204ENST00000580498 GOLGA6L9A6NEM1 432 aa20■□□□□ 0.79
SMG8-204ENST00000580498 D6RAR5 112 aa20■□□□□ 0.79
SMG8-204ENST00000580498 APOC4-APOC2K7ER74 178 aa20■□□□□ 0.79
SMG8-204ENST00000580498 NTN3O00634 580 aaPredicted RBP20■□□□□ 0.79
SMG8-204ENST00000580498 APOC2P02655 101 aa20■□□□□ 0.79
SMG8-204ENST00000580498 FECHP22830 423 aa20■□□□□ 0.79
SMG8-204ENST00000580498 CTNNA1P35221 906 aaKnown RBP20■□□□□ 0.79
SMG8-204ENST00000580498 EIF2S3P41091 472 aaKnown RBP20■□□□□ 0.79
SMG8-204ENST00000580498 CCL7P80098 99 aa20■□□□□ 0.79
SMG8-204ENST00000580498 CTBSQ01459 385 aa20■□□□□ 0.79
SMG8-204ENST00000580498 HLTFQ14527 1009 aaKnown RBP eCLIP20■□□□□ 0.79
SMG8-204ENST00000580498 LLGL1Q15334 1064 aa20■□□□□ 0.79
SMG8-204ENST00000580498 CLPPQ16740 277 aaPredicted RBP20■□□□□ 0.79
SMG8-204ENST00000580498 COL28A1Q2UY09 1125 aa20■□□□□ 0.79
SMG8-204ENST00000580498 MAP9Q49MG5 647 aa20■□□□□ 0.79
SMG8-204ENST00000580498 ZDHHC20Q5W0Z9 365 aa20■□□□□ 0.79
SMG8-204ENST00000580498 BBS12Q6ZW61 710 aa20■□□□□ 0.79
SMG8-204ENST00000580498 LYSMD3Q7Z3D4 306 aa20■□□□□ 0.79
SMG8-204ENST00000580498 TMEM159Q96B96 161 aa20■□□□□ 0.79
SMG8-204ENST00000580498 PPP1R2P1Q96PQ5 205 aa20■□□□□ 0.79
SMG8-204ENST00000580498 FSD1LQ9BXM9 530 aa20■□□□□ 0.79
SMG8-204ENST00000580498 HACD3Q9P035 362 aa20■□□□□ 0.79
SMG8-204ENST00000580498 SAE1Q9UBE0 346 aaPredicted RBP20■□□□□ 0.79
SMG8-204ENST00000580498 TMEM98Q9Y2Y6 226 aa20■□□□□ 0.79
SMG8-204ENST00000580498 ZNF711Q9Y462 761 aa20■□□□□ 0.79
SMG8-204ENST00000580498 PCDHA3Q9Y5H8 950 aa20■□□□□ 0.79
SMG8-204ENST00000580498 SPEGQ15772 3267 aa20■□□□□ 0.79
SMG8-204ENST00000580498 GPR89AB7ZAQ6 455 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 NOBOXO60393 691 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 TJP3O95049 919 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 GPR89BP0CG08 455 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 PECAM1P16284 738 aaPredicted RBP19.99■□□□□ 0.79
SMG8-204ENST00000580498 POLD2P49005 469 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 DCDC1P59894 354 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 MPP3Q13368 585 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 PRPSAP1Q14558 356 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 HENMT1Q5T8I9 393 aaKnown RBP19.99■□□□□ 0.79
SMG8-204ENST00000580498 IGF2-ASQ6U949 168 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 RFLNAQ6ZTI6 216 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 CDKL3Q8IVW4 592 aaPredicted RBP19.99■□□□□ 0.79
SMG8-204ENST00000580498 AVL9Q8NBF6 648 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 CCL4L1Q8NHW4 92 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 SCARF2Q96GP6 870 aaPredicted RBP19.99■□□□□ 0.79
SMG8-204ENST00000580498 LIN37Q96GY3 246 aaPredicted RBP19.99■□□□□ 0.79
SMG8-204ENST00000580498 COX14Q96I36 57 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 QKIQ96PU8 341 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMG8-204ENST00000580498 HEMGNQ9BXL5 484 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMG8-204ENST00000580498 RSPH14Q9UHP6 348 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 AMFRQ9UKV5 643 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 SHOC2Q9UQ13 582 aa19.99■□□□□ 0.79
SMG8-204ENST00000580498 RNF215Q9Y6U7 377 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms